Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_4460 |
Symbol | |
ID | 5368647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | + |
Start bp | 5073004 |
End bp | 5073744 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640806866 |
Product | transcriptional regulator, TrmB |
Protein accession | YP_001343290 |
Protein GI | 152998455 |
COG category | [K] Transcription |
COG ID | [COG1378] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000000101535 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATTCAGC AAGCTTTTGA AATGCTTGGT TTAACACCAA GGGAAACGCA ACTTTATCAA ACGTTATTAA AGCTCGGACC TTCTTCTATT AGAGATATTG CCGAACATAG TGGCATCAAT CGCGGAACAG CCTATGAGTC ACTAAAGCAG TTACAAAGCA AAGGGATTGT TAGCTATTTT CCAAAGGGAA AACGCCGACT GTTTACCGCA GAAAATCCCG ATATTTTATT GAATCTCGCG GAAGAAAAAC GCAACCGCTT AGACAAAACC ATCGACAATC TTAAAAATAC GATTATTCCA AACCTACACC AACAACAGCC AGATTATCAC CAAACCCATG TGCGTTATTA TGAAGGCGAT GATGGTATTG AGTGGGTGTT GCGCGATATT TTAAACGTGG TCTCGCAACA AGACCACAAA GAATATTGCG TGTTTTCATC CAAACCCATT CGTCCCTTTT TGTACCGCCC ATTTCCTAAC TACACCAAGC AACGAGTAAA GCTCGGCATT AACGTAAAAG TGATCGCGCT TGGCGATGGT GGTGAAGAAG CACAATTATC GGAACGTAAG TGGATTAAAA CAGAAGGTTC TGTGGATGCC AGCTACATAG CAATCTATCC GCCCAAATGT GCCATCATCT CACTAGCCAG TAACAACTTT CCTTCCGCCG TGGTATTGGA ATCTAAAGAC ATAGCCAAAG CACAACAGAT TATTTTCGAC ACTCTGTGGA AGATGCTTTA A
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Protein sequence | MIQQAFEMLG LTPRETQLYQ TLLKLGPSSI RDIAEHSGIN RGTAYESLKQ LQSKGIVSYF PKGKRRLFTA ENPDILLNLA EEKRNRLDKT IDNLKNTIIP NLHQQQPDYH QTHVRYYEGD DGIEWVLRDI LNVVSQQDHK EYCVFSSKPI RPFLYRPFPN YTKQRVKLGI NVKVIALGDG GEEAQLSERK WIKTEGSVDA SYIAIYPPKC AIISLASNNF PSAVVLESKD IAKAQQIIFD TLWKML
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