8 homologs were found in PanDaTox collection
for query gene VIBHAR_01558 on replicon NC_009783
Organism: Vibrio harveyi ATCC BAA-1116



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009783  VIBHAR_01558  hypothetical protein  100 
 
 
335 aa  661    Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011313  VSAL_II0572  outer membrane protein, putative porin  22.77 
 
 
312 aa  49.7  0.00007  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_2057  porin  25.72 
 
 
359 aa  45.4  0.001  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_011312  VSAL_I0588  major outer membrane protein OmpU  25.15 
 
 
333 aa  45.1  0.002  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.0116995  n/a   
 
 
-
 
NC_011205  SeD_A1770  outer membrane porin protein LC  26.44 
 
 
362 aa  43.1  0.006  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.895795 
 
 
-
 
NC_011080  SNSL254_A1687  outer membrane porin protein LC  26.44 
 
 
362 aa  43.1  0.007  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal  0.535168 
 
 
-
 
NC_011083  SeHA_C1750  outer membrane porin protein LC  26.44 
 
 
362 aa  43.1  0.007  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.778273  normal 
 
 
-
 
NC_011094  SeSA_A1689  outer membrane porin protein LC  26.44 
 
 
362 aa  43.1  0.007  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.808726 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>