Gene VIBHAR_01558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01558 
Symbol 
ID5553387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp1565704 
End bp1566711 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content43% 
IMG OID640907049 
Producthypothetical protein 
Protein accessionYP_001444755 
Protein GI156973848 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA CTCTAGTAGC TCTAGCAGTA GCAGGCATCT CTACGTCTGC ACTAGCAGCA 
GGCAACATCT ACGACAACGG TACAACATCT TTCAATGTTA AAGGTGAAAT CGATACTTAT 
GTAACTACTC TAAAGAGCAA GTACAAAAAC GTAGAAAAGT CATCTGATCT AGATATCGAT 
GTTTGGGCTA AAATCCAAAT CGATTCTCAA CACAAAGTAA ACGAAGATAT CACTGTATTC 
GGTTCTTTCG AAATGCAAAA CGGCGAAGGC TTTGGTTTTG ACGGCGACGG CTTTGCAGGC 
GACGACAAAA ACGTACAAAC TGATGACCTA TACTTCGGTG CTTACCTAGG CGACAACTGG 
GGTGTGGCTC TAGGTGAAAT CGGCGATTTC GGCGACTCTC TAGACGCAAT CACTATCGAC 
AACACTAACG AAGGCCTTGG TTACGTAGAT GACTTCGTAA TTTCTCAAGA AAGCCGTGGT 
CACGCAGCTT CTGTAAAAGG TAACTTCAAC AACCTAACTG TTATTGCTGA TGCATACCTA 
AACCAAGAAG AGAACATCGA CACTGCGTTT GGTCTATCTG CACAATACGC AATCAACGAC 
ATGTTCACAG TTGGTGCTTC CTACCAAGAT CAAGGTGAGA ACGAAGTTAA GAAACTTGAC 
TACAAAGTGA TGGGTGTTGC TGCTCGTCTA AACATTGAAA ACTTCGCGGC AGCTGTAAAC 
TACGTTGCTG AAGAGAAGAA AGAAGCTAAC GTTAAAAACG ACGCTGACAC TTGGTCTGTA 
GCTGCTTCTT ACCAAATCAA TGAAGCTCGT CTATACACTT CATTTGGCTT CACTAGCTAC 
GAAGACAACA AAGACGGCAA CTACTACACT CTAGGTGCTG ACTACGCTCT AACAGGTAAC 
ATCCTTACGT TCATTGAATA CACAGCAATC GACGAAGATG AAGGCGTAGG CAAAACTAAG 
CTAGACGAAG GCGAAGTAGT TGTAGCTGGT CTATACTACA CGTTCTAA
 
Protein sequence
MKKTLVALAV AGISTSALAA GNIYDNGTTS FNVKGEIDTY VTTLKSKYKN VEKSSDLDID 
VWAKIQIDSQ HKVNEDITVF GSFEMQNGEG FGFDGDGFAG DDKNVQTDDL YFGAYLGDNW 
GVALGEIGDF GDSLDAITID NTNEGLGYVD DFVISQESRG HAASVKGNFN NLTVIADAYL 
NQEENIDTAF GLSAQYAIND MFTVGASYQD QGENEVKKLD YKVMGVAARL NIENFAAAVN 
YVAEEKKEAN VKNDADTWSV AASYQINEAR LYTSFGFTSY EDNKDGNYYT LGADYALTGN 
ILTFIEYTAI DEDEGVGKTK LDEGEVVVAG LYYTF