10 homologs were found in PanDaTox collection
for query gene VC0395_1129 on replicon NC_009456
Organism: Vibrio cholerae O395



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009456  VC0395_1129  TagA-related protein  100 
 
 
1247 aa  2598    Vibrio cholerae O395  Bacteria  hitchhiker  0.0000117742  n/a   
 
 
-
 
NC_009783  VIBHAR_02167  hypothetical protein  52.91 
 
 
671 aa  739    Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009457  VC0395_A0345  ToxR-activated gene A protein  40.65 
 
 
1013 aa  572  1e-161  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_02172  hypothetical protein  47.74 
 
 
365 aa  349  2e-94  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009783  VIBHAR_02169  hypothetical protein  71.96 
 
 
214 aa  310  9e-83  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013172  Bfae_30260  Peptidase M66  36.65 
 
 
1056 aa  253  2e-65  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_02194  hypothetical protein  37.13 
 
 
985 aa  243  2e-62  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011350  ECH74115_B0001  hypothetical protein  37.57 
 
 
898 aa  201  1.0000000000000001e-49  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.362485  normal  0.442936 
 
 
-
 
NC_011664  Sbal223_4351  hypothetical protein  35.65 
 
 
885 aa  189  3e-46  Shewanella baltica OS223  Bacteria  decreased coverage  0.0000110268  normal 
 
 
-
 
NC_011665  Sbal223_4488  hypothetical protein  35.65 
 
 
885 aa  189  3e-46  Shewanella baltica OS223  Bacteria  decreased coverage  0.0000000018455  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>