| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_1129 |
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| Symbol | |
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| ID | 5134832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 1093119 |
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| End bp | 1096862 |
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| Gene Length | 3744 bp |
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| Protein Length | 1247 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640531451 |
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| Product | TagA-related protein |
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| Protein accession | YP_001215965 |
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| Protein GI | 147671474 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000117742 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAGA AACCATTAAC GCTTCTGATA GCTGGGCTAT TGGGAAGCAC ATCGGCGTGG
GCGCAACATG AGCTCACTCT GGTGCAGATC GGCGAAAAAA CCGTTGAGCG GCTAGAATCG
ATTAAAGCCA TGGCCGAACG TGGAGAAGGG GTATTTGAGC GCAATGGCGA ACGCTGGATC
CGTTACAAAG GGACGGACTA TCGCCTGAGC TACAAAAATG ATCTGCAGTT CCCTTTTCTG
CCTTATCAAG GCGGCGATGA TACGCCTTAT CGCAACGTGA TTGACTTTGT CGATCAGAGT
TGGGAATTCA TGATGTATGA CGGCGGTTTT TATCTCATGA GCCGTGAATT TGGTGTTTAC
GAATCAGACG AGCAAGGCTG CTTTATTGAG TACATTCCTG CGTCACACGG CTCTAAGCGT
GCCGACGGCA GCTACATTTG GGAGCGTGAT GTCATCTATC GCACCGAAAC CAATGATTGC
GGTGCGTTAG TAAAGCCAGA GATTCGCTCG TTAACCGTTT CGAGCCTGTC TGATGTCGGT
GTGTCATTTG ACTGGCTTGG GCAAAACGAA ACGGACTCAG TGACACTCAC GGTCACTAAC
CTCAGTGATC ACAGTGATGT TCGACGTTAT GACCATGTTT CTGCGGGTTT CTTTGTGGGT
GGGCTTAAGC CAGAAACCCA GTATGAAATA GCCCTCAGTT CCTGCAATCA AGTCGATTGC
GCTGAGCCGA AAGTGGTGCG CTTCACAACT CAGGAAGCTC GAGTTGGCTT TGCTGATGAG
ATCCCAACCC CGAACCATTT GCAAGGCAGT TTAGAAGGCG GGTTGAGCAT CACGCAAACC
CATACTTCGG TTGCGCCCAA GGGCAATGAG CTGACTGGGC AAGGCCATCT CGATGCGATC
ATGAACCGTG AAGCTTTACT GCTGTTTACG CCGCAGCAAG GTGAGGAGAT TAACCAAGTC
CGCGCCGAAG TGTTCCTCGA TGGCGAATTA GTGCAAACCA TCTTGATGCT GCCGCCCAGT
GCTCTGGCCG CGTCGGATCA GCCAGAAAAT GGCCGCATGA AAGTGGTATT TTCGCATCAT
GCATGGTCGC TGCCCCTGCA ATGGGATTGG ATGAAGCCGG GACTATCGCT GCGCCTGACT
GACAACTTAG GCCGTGAGGG GGTGCTCAGC CAAGGTGAAA TCCAGTTTGG CGGTGCGCCT
GAGTTGGTGA TCCAGAACAT CGATATCGGC ATGTTAATGC CACCGCGGGA TCGCAACACC
ATGATCCAAA ACTTGCCTAC GCTTGCGGCG GATTATTTCC AGAAAATTCC AGCCTCTAAA
CTGGTGATGG CCGATTATAC GCCAGCGCAT TTCCCAGTCG TGACCATGCC AAACGGTGTG
GTGTATACCG ATAAGAGCGC AAGTACGGGC GGTTGGCACA GCGGTGATAT GCGTGAAGCG
ATCGGTAAAG CCATGGTCTC TACGGGTATC AACAATGCCA ACGTCGGTAT TGTGAGCAGT
GCGGGTTATT CGCAGCAGTA CAATCGACGT TTTAACCACA TCACAGCCCA TACCAATGTG
GGCATCTACA CCAAAAAAGA CACGGATTTA CCGCAAGTCG TGGTGCATGG CGGCAGTGGT
GGCGGTGGCA TCGTGACACT GGAGGCGACG ACAGGTAACG AGTGGTCTCA TGAGCTTGGG
CATAACTATG GCTTAGGTCA TTGGCCGTAC ATGGCCTCGA TTCACGATAT GGAGTCCGGT
TGGGGTTGGG ATGCGTTCCA CCAACGCTTT ATTGGTAACT TACACTGGAA AGGCGATGTT
TATACCCAAC AGCAAGGTGA TGATATTGTG CCACCGTTTA AAGATGCGTT TCGTTTCTTA
CGTGATGCGC AAAATGGCGG AGAGCAAGAG TACGTTGGCA CCATCAGCCG CTTTACCTTG
GAGCATCCGG CTCAGTCGCG CAAAGCACAG CGTTGGATGA ACAACGGCTT CAACCTAGAT
AGCCACAGCC CAAGCGGCTA TGTGCAATGG GATCAGGCGA CGCAACGTTA TAAAGCCGTC
GAAACGGATA CACCCAAACC CCAGCAAGTG GGTGTGCCGG TAGTGACCTT ATTGGGGATT
TACGATCCGC AGAATGAGAA CCCTAGCCAA ATCTATCCTC TGGTTTACTC AAATTATGGC
AACCTGTTTG AGCTGCCACA GCCAGAGCAA GGTGAGTATC AGCTAGAAGG TTGGCAAGCG
GTCGGGGATC TCACTCAAGC CCAAATCCAA AATAACCAAT GGCAGACGCT ACTGATTGAT
GGGCAACAAC TGCCAATTTG CCGCTTTGAT TACACCAATA CCAATGGTCA AAGCGCGACG
TTTGTTGGCG GCTTAAATGC ACAGCGTAAC GTGTGTGAAG GTAGCCGAGA TATGCGCTGG
TATAACGATT ATCAGATTGA TTCGCTAGTG GGGCAGTACG AGTTACTTTC ACAATTTGGT
GCAGGCAATG TGACCTACAC TCCGAATGCG GAGATTGGAG AAGTGCAACT GTGTACTCTA
AACAAGCCGC ACAATAACGG TAGTCATGAC GGGGCAGGTT TTGTTCGCAA TGGCCGCTGT
GAGCAAGTCG AAGGCGTGAA AAATAACGCT GAAGGTCGCG TTTGGAGCTA TGCAATTCGT
AATAGCGAAG TGTTGTCGAG AACCTTAGCT TCTCAACGTC GTTGTGAGTT AGTGGTGGAA
CATCGCAATG GTTCAACCCA CATCGCACTG GATGGCAATC GTCATAAATC GACCGAAAGT
AACAAGTTCC ACGTTAACTT ATCGATGGAA AAAGGTGTAC CTACCCAAGT GAGTTTGAGC
TGTAGTGACC TTAACGGTAC TTCAACGCTG ACACGTTTCA CGCCAGATCA GAATCCGCCG
CTGGATAAGC TCAAAGGTCC AATCATCATC GGTCAGGAAT ACGGTTACAG CCAAGTCATC
GATATGACGA AAACCTTCGC CCAGAACCAG ACTTTGCTGA ACACGGATTT TGCGACCATC
GCTGAGTTTG ATGCCTTTGT GGCCGAACAC TATGGGCGCG GCGTGCTCAA CAATGGTGTG
ACAAAAGCGG AGCGCCGTGC AGGGGCGTTG TATGTTTACC CGAATCCAGA AACGGGCACG
CGCGACTACT TTGTGATGCG CACGCTTGAA GCTGGGGCGT TCCCGACCGA CCAAACCAGT
GATCAAGGTT GGAAATACCT TGGCTCGGCA GATGACCACA TTAACTTTGC TTTCAACCCA
ATCAAGCTCA ACAGAGCCGA GGGTGTGAGC GTTGAAGCAC GTGTGCAAAG CTACTTTGGT
GTATCACGCT TGCTGACATG GGATGAACGC ACCTCAACCA CGTGGGACAA CGCTTATAAC
GCAGTGTTTG TTGGTCAAAT CGAAGGTGAA AACCATTACT TTATCCAAAA GCGTCCGGGC
GAAGGGGAGG CATTCCCAAC GCGCGGAGCG TCAAACCAAG ATTGGATTTG GCTAGGCAGT
GACTCTTCTA TTCAAGAGAC TCTTACTGAG CTCAATCGCG ATCTGGCCAG CTTTGAGCGG
ATGCTGCTGG AATGGTATCA ACAAGACGCG ATGGGCGTGT GGGGCAGTGA TGGTCAGCGT
GGCAACGTGA ACGATATTTA TCAATATGCG TTTAGAGGTG GCTACCACTA CTACCGCTTG
AAAGTGACGA AGTATGGTTA TTTCCCTTAC CCAACCGATC CCAATCCAAC TAATGGACAC
TGGGAATATC TCGGCCAGTT TTAA
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| Protein sequence | MNKKPLTLLI AGLLGSTSAW AQHELTLVQI GEKTVERLES IKAMAERGEG VFERNGERWI
RYKGTDYRLS YKNDLQFPFL PYQGGDDTPY RNVIDFVDQS WEFMMYDGGF YLMSREFGVY
ESDEQGCFIE YIPASHGSKR ADGSYIWERD VIYRTETNDC GALVKPEIRS LTVSSLSDVG
VSFDWLGQNE TDSVTLTVTN LSDHSDVRRY DHVSAGFFVG GLKPETQYEI ALSSCNQVDC
AEPKVVRFTT QEARVGFADE IPTPNHLQGS LEGGLSITQT HTSVAPKGNE LTGQGHLDAI
MNREALLLFT PQQGEEINQV RAEVFLDGEL VQTILMLPPS ALAASDQPEN GRMKVVFSHH
AWSLPLQWDW MKPGLSLRLT DNLGREGVLS QGEIQFGGAP ELVIQNIDIG MLMPPRDRNT
MIQNLPTLAA DYFQKIPASK LVMADYTPAH FPVVTMPNGV VYTDKSASTG GWHSGDMREA
IGKAMVSTGI NNANVGIVSS AGYSQQYNRR FNHITAHTNV GIYTKKDTDL PQVVVHGGSG
GGGIVTLEAT TGNEWSHELG HNYGLGHWPY MASIHDMESG WGWDAFHQRF IGNLHWKGDV
YTQQQGDDIV PPFKDAFRFL RDAQNGGEQE YVGTISRFTL EHPAQSRKAQ RWMNNGFNLD
SHSPSGYVQW DQATQRYKAV ETDTPKPQQV GVPVVTLLGI YDPQNENPSQ IYPLVYSNYG
NLFELPQPEQ GEYQLEGWQA VGDLTQAQIQ NNQWQTLLID GQQLPICRFD YTNTNGQSAT
FVGGLNAQRN VCEGSRDMRW YNDYQIDSLV GQYELLSQFG AGNVTYTPNA EIGEVQLCTL
NKPHNNGSHD GAGFVRNGRC EQVEGVKNNA EGRVWSYAIR NSEVLSRTLA SQRRCELVVE
HRNGSTHIAL DGNRHKSTES NKFHVNLSME KGVPTQVSLS CSDLNGTSTL TRFTPDQNPP
LDKLKGPIII GQEYGYSQVI DMTKTFAQNQ TLLNTDFATI AEFDAFVAEH YGRGVLNNGV
TKAERRAGAL YVYPNPETGT RDYFVMRTLE AGAFPTDQTS DQGWKYLGSA DDHINFAFNP
IKLNRAEGVS VEARVQSYFG VSRLLTWDER TSTTWDNAYN AVFVGQIEGE NHYFIQKRPG
EGEAFPTRGA SNQDWIWLGS DSSIQETLTE LNRDLASFER MLLEWYQQDA MGVWGSDGQR
GNVNDIYQYA FRGGYHYYRL KVTKYGYFPY PTDPNPTNGH WEYLGQF
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