14 homologs were found in PanDaTox collection
for query gene Tpau_4012 on replicon NC_014158
Organism: Tsukamurella paurometabola DSM 20162



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014158  Tpau_4012  Polyketide cyclase/dehydrase  100 
 
 
148 aa  300  6.000000000000001e-81  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_0430  Polyketide cyclase/dehydrase  62.16 
 
 
146 aa  172  9.999999999999999e-43  Gordonia bronchialis DSM 43247  Bacteria  normal  0.763548  n/a   
 
 
-
 
NC_008726  Mvan_5530  hypothetical protein  62.59 
 
 
154 aa  170  7.999999999999999e-42  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_4906  hypothetical protein  59.06 
 
 
147 aa  166  9e-41  Mycobacterium sp. MCS  Bacteria  normal  0.730263  n/a   
 
 
-
 
NC_008705  Mkms_4995  hypothetical protein  59.06 
 
 
147 aa  166  9e-41  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_5274  hypothetical protein  58.39 
 
 
147 aa  166  1e-40  Mycobacterium sp. JLS  Bacteria  normal  0.250946  normal 
 
 
-
 
NC_009338  Mflv_1285  hypothetical protein  58.39 
 
 
149 aa  163  6.9999999999999995e-40  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_13750  hypothetical protein  55.1 
 
 
147 aa  153  8e-37  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.316158 
 
 
-
 
NC_009664  Krad_1078  hypothetical protein  55.24 
 
 
147 aa  139  9.999999999999999e-33  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.792268  normal 
 
 
-
 
NC_013159  Svir_02520  Polyketide cyclase / dehydrase and lipid transport  53.74 
 
 
151 aa  137  3.9999999999999997e-32  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.101548  normal 
 
 
-
 
NC_013510  Tcur_0889  hypothetical protein  51.02 
 
 
146 aa  134  6.0000000000000005e-31  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_0865  Polyketide cyclase/dehydrase  48.3 
 
 
151 aa  123  1e-27  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_0219  hypothetical protein  44.76 
 
 
148 aa  117  6e-26  Frankia sp. CcI3  Bacteria  normal  normal  0.261485 
 
 
-
 
NC_009921  Franean1_6670  hypothetical protein  43.54 
 
 
149 aa  110  9e-24  Frankia sp. EAN1pec  Bacteria  normal  0.0325183  normal  0.950066 
 
 
-
 
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