7 homologs were found in PanDaTox collection
for query gene Tgr7_3097 on replicon NC_011901
Organism: Thioalkalivibrio sp. HL-EbGR7



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011901  Tgr7_3097  cytochrome c-552 like protein  100 
 
 
106 aa  223  6e-58  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.517981  n/a   
 
 
-
 
NC_013889  TK90_0687  hypothetical protein  62.12 
 
 
107 aa  90.1  8e-18  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.594969  normal  0.0275518 
 
 
-
 
NC_013946  Mrub_0431  cytochrome c class I  38.33 
 
 
232 aa  60.8  0.000000006  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.472304 
 
 
-
 
NC_010730  SYO3AOP1_0083  cytochrome c oxidoreductase subunit B  33.85 
 
 
92 aa  46.6  0.0001  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  decreased coverage  0.00000000000280154  n/a   
 
 
-
 
NC_008228  Patl_2873  hypothetical protein  31.96 
 
 
131 aa  43.1  0.001  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_2982  hypothetical protein  35.82 
 
 
116 aa  42.7  0.002  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_3623  hypothetical protein  33.9 
 
 
135 aa  42.4  0.002  Spirosoma linguale DSM 74  Bacteria  normal  0.599999  normal 
 
 
-
 
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