4 homologs were found in PanDaTox collection
for query gene Tcr_1857 on replicon NC_007520
Organism: Thiomicrospira crunogena XCL-2



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007520  Tcr_1857    100 
 
 
2422 bp  4801    Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_1643  hypothetical protein  100 
 
 
1086 bp  101  9e-19  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_03523  TrbC-like protein  97.44 
 
 
1164 bp  69.9  0.000000003  Escherichia coli BL21(DE3)  Bacteria  normal  0.236251  n/a   
 
 
-
 
NC_010658  SbBS512_E1688    97.37 
 
 
2452 bp  67.9  0.00000001  Shigella boydii CDC 3083-94  Bacteria  decreased coverage  0.00110161  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>