13 homologs were found in PanDaTox collection
for query gene TM1040_1806 on replicon NC_008044
Organism: Ruegeria sp. TM1040



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008044  TM1040_1806  protein of unknown function DUF883, ElaB  100 
 
 		 97 aa  189  1e-47  Ruegeria sp. TM1040  Bacteria  normal  0.55805  normal  0.0781076 
 
 
-
 
NC_009720  Xaut_2025  hypothetical protein  36.96 
 
 		 99 aa  51.2  0.000005  Xanthobacter autotrophicus Py2  Bacteria  normal  0.630849  normal  1 
 
 
-
 
NC_008463  PA14_24770  hypothetical protein  35.78 
 
 		 109 aa  50.8  0.000007  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009656  PSPA7_2098  hypothetical protein  35.78 
 
 		 109 aa  50.8  0.000007  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_0124  hypothetical protein  29.81 
 
 		 104 aa  48.1  0.00004  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011988  Avi_6004  hypothetical protein  32.61 
 
 		 99 aa  47.8  0.00005  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_011369  Rleg2_1819  hypothetical protein  34.09 
 
 		 93 aa  45.8  0.0002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0974773  decreased coverage  0.000815621 
 
 
-
 
NC_012850  Rleg_2014  hypothetical protein  32.95 
 
 		 137 aa  44.7  0.0004  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  0.359333 
 
 
-
 
NC_011666  Msil_0288  protein of unknown function DUF883 ElaB  33.68 
 
 		 106 aa  43.5  0.001  Methylocella silvestris BL2  Bacteria  n/a    normal  0.166783 
 
 
-
 
NC_004578  PSPTO_2334  hypothetical protein  32.67 
 
 		 104 aa  41.6  0.003  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.666966  n/a   
 
 
-
 
NC_009667  Oant_1251  hypothetical protein  29.47 
 
 		 117 aa  42  0.003  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.477256  n/a   
 
 
-
 
NC_007005  Psyr_2118  hypothetical protein  31.68 
 
 		 104 aa  40.4  0.008  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.365861  normal  0.361431 
 
 
-
 
NC_008686  Pden_1394  protein of unknown function DUF883, ElaB  38.16 
 
 		 142 aa  40.4  0.008  Paracoccus denitrificans PD1222  Bacteria  normal  1  normal  0.188746 
 
 
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