Gene TM1040_1806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1806 
Symbol 
ID4076952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1897294 
End bp1897587 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content65% 
IMG OID638007121 
Productprotein of unknown function DUF883, ElaB 
Protein accessionYP_613801 
Protein GI99081647 
COG category[S] Function unknown 
COG ID[COG4575] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.55805 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0781076 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAAGG ATCAAGCCGC CCCCTCGAGT GACGAAATTA TTGCCCAGAT GGATGTGCTG 
CGCTCTGACA TTGCGGAGTT GAGCAAATCC GTCTCTCATC TCGCCAAGGA CCGCGTAGGC
AAGGCGCGGG ACGCCGCCCG CGAGACCGCC CGCGATCAAG CCCAGACCGT TGCCGATGGG
GCCGCGCAGA TGAGCCGTCA GGCCGAAGAC GCGGTACGCG CGCAGCCGCT CGCCGCGACC
GCGATTGCTG CGGGGCTTGG CTTTGCTTTG GGTTACCTGA GCAACCGTCG GTAA
 
Protein sequence
MPKDQAAPSS DEIIAQMDVL RSDIAELSKS VSHLAKDRVG KARDAARETA RDQAQTVADG 
AAQMSRQAED AVRAQPLAAT AIAAGLGFAL GYLSNRR