7 homologs were found in PanDaTox collection
for query gene Suden_R0042 on replicon NC_007575
Organism: Sulfurimonas denitrificans DSM 1251



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007575  Suden_R0042  tRNA-Leu  100 
 
 
84 bp  167  5e-40  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.30317  n/a   
 
 
-
 
NC_007520  Tcr_R0032  tRNA-Leu  100 
 
 
87 bp  60  0.00000009  Thiomicrospira crunogena XCL-2  Bacteria  hitchhiker  0.00145476  n/a   
 
 
-
 
NC_008228  Patl_R0074  tRNA-Leu  100 
 
 
86 bp  60  0.00000009  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.300067  n/a   
 
 
-
 
NC_009654  Mmwyl1_R0062  tRNA-Leu  96.77 
 
 
85 bp  54  0.000005  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.0000163456  normal  0.0301786 
 
 
-
 
NC_009654  Mmwyl1_R0066  tRNA-Leu  96.77 
 
 
85 bp  54  0.000005  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.0822521 
 
 
-
 
NC_013512  Sdel_R0028  tRNA-Leu  84.81 
 
 
85 bp  54  0.000005  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_rna084  tRNA-Leu  93.33 
 
 
85 bp  44.1  0.005  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
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