5 homologs were found in PanDaTox collection
for query gene Ssed_2581 on replicon NC_009831
Organism: Shewanella sediminis HAW-EB3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009831  Ssed_2581  hypothetical protein  100 
 
 
50 aa  107  4.0000000000000004e-23  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_2442  hypothetical protein  71.43 
 
 
163 aa  84.7  4e-16  Colwellia psychrerythraea 34H  Bacteria  normal  0.170561  n/a   
 
 
-
 
NC_010506  Swoo_4052  AIG2 family protein  53.06 
 
 
162 aa  63.9  0.0000000006  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_011365  Gdia_2771  AIG2 family protein  45.1 
 
 
494 aa  47.8  0.00005  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_007484  Noc_2712  hypothetical protein  38.78 
 
 
180 aa  40.8  0.006  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.572174  n/a   
 
 
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