8 homologs were found in PanDaTox collection
for query gene Shel_26560 on replicon NC_013165
Organism: Slackia heliotrinireducens DSM 20476



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013165  Shel_26560  tRNA-Gln  100 
 
 
74 bp  147  4.0000000000000006e-34  Slackia heliotrinireducens DSM 20476  Bacteria  unclonable  0.00000051562  normal 
 
 
-
 
NC_013174  Jden_R0060  tRNA-Gln  94.74 
 
 
75 bp  81.8  0.00000000000002  Jonesia denitrificans DSM 20603  Bacteria  normal  0.0418927  normal 
 
 
-
 
NC_013530  Xcel_R0053  tRNA-Gln  94.74 
 
 
75 bp  81.8  0.00000000000002  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.102013  n/a   
 
 
-
 
NC_013521  Sked_30190  tRNA-Gln  92.98 
 
 
72 bp  73.8  0.000000000005  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.548182  normal  0.107034 
 
 
-
 
NC_010816  BLD_t0015  tRNA-Gln  87.1 
 
 
71 bp  60  0.00000007  Bifidobacterium longum DJO10A  Bacteria  normal  0.165404  n/a   
 
 
-
 
NC_008025  Dgeo_R0012  tRNA-Gln  83.78 
 
 
74 bp  52  0.00002  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.0990174  normal 
 
 
-
 
NC_013721  HMPREF0424_1395  tRNA-Gln  85 
 
 
71 bp  48.1  0.0003  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_011831  Cagg_R0019  tRNA-Gln  85.19 
 
 
74 bp  44.1  0.004  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.0000894602  normal 
 
 
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