5 homologs were found in PanDaTox collection
for query gene Shel_20220 on replicon NC_013165
Organism: Slackia heliotrinireducens DSM 20476



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013165  Shel_20220  predicted endonuclease related to Holliday junction resolvase  100 
 
 
130 aa  268  2e-71  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.0533456  normal  0.101532 
 
 
-
 
NC_013203  Apar_1209  hypothetical protein  29 
 
 
117 aa  50.4  0.000008  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_19120  predicted endonuclease related to Holliday junction resolvase  32.99 
 
 
117 aa  49.7  0.00001  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.651626  normal  0.248755 
 
 
-
 
NC_013170  Ccur_13870  hypothetical protein  39.68 
 
 
249 aa  42.7  0.002  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_3909  hypothetical protein  27.83 
 
 
141 aa  40.4  0.009  Opitutus terrae PB90-1  Bacteria  normal  0.181431  normal  0.486883 
 
 
-
 
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