Gene Shel_19120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_19120 
Symbol 
ID8395801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2147121 
End bp2147474 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content67% 
IMG OID644986663 
Productpredicted endonuclease related to Holliday junction resolvase 
Protein accessionYP_003144277 
Protein GI257064605 
COG category[L] Replication, recombination and repair 
COG ID[COG0792] Predicted endonuclease distantly related to archaeal Holliday junction resolvase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.651626 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.248755 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGCAA CGATTCAGAG GGCGAAGCAG GGCGTCAGGC GCTATCTGGA GCTCAAGGGC 
TACGAGATCC TCGAGGACGG CTGGTGCCAC GGCAGGGACT CCGTCGACTT CATCGCCACC
GACGAGGACG ACGCGCTGGT CTTCATCGAC TGCGAGGTCA GCGAGAACGC CGGCGAGGGC
ATCCCGGAGG AGGCGCCGGA CCGCAAGGCC TTCGAGCGCA TCGCCGCGGC TTACCTGGCC
GAGGCCGACC TGAGCAACAC CGAGGTCCGA TACGACATCG TGGGCGTGCT CATCCTCGGG
GAGAGCCGGG CGCTCATCCG CCACCACATC AACGCGATCA CGCCGCTGGG GTAA
 
Protein sequence
MEATIQRAKQ GVRRYLELKG YEILEDGWCH GRDSVDFIAT DEDDALVFID CEVSENAGEG 
IPEEAPDRKA FERIAAAYLA EADLSNTEVR YDIVGVLILG ESRALIRHHI NAITPLG