7 homologs were found in PanDaTox collection
for query gene Sfri_3409 on replicon NC_008345
Organism: Shewanella frigidimarina NCIMB 400



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008345  Sfri_3409  hypothetical protein  100 
 
 
138 aa  276  5e-74  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_1160  hypothetical protein  48.15 
 
 
140 aa  133  7.000000000000001e-31  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_4744  hypothetical protein  34.85 
 
 
140 aa  74.3  0.0000000000005  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.152397 
 
 
-
 
NC_009901  Spea_0139  hypothetical protein  34.09 
 
 
140 aa  70.5  0.000000000008  Shewanella pealeana ATCC 700345  Bacteria  normal  0.130279  n/a   
 
 
-
 
NC_009831  Ssed_4363  hypothetical protein  34.35 
 
 
140 aa  69.3  0.00000000002  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_3626  hypothetical protein  38.75 
 
 
141 aa  59.3  0.00000002  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_1026  hypothetical protein  31.65 
 
 
124 aa  42.4  0.002  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
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