Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_4363 |
Symbol | |
ID | 5610942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 5340810 |
End bp | 5341232 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640935333 |
Product | hypothetical protein |
Protein accession | YP_001476093 |
Protein GI | 157377493 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGTA TTTTCAATGC ACTCTGCTCC AAGGGGCTAC CGGCAAGAGA TCTGAAGAAT GCCAACCGAG TTAACTTGCT TGCTGTACTT TGGGCACTAT CACTCTTGGT CGGCTCACTG CTGTCCCAAT ACTATTCTTT ATCCGTCTTG GTAATCAGCC TCGCATTCAT CACTCACACT GTCATAGGCA TTGCCATGGT GTTTGCCTAC AAACGATACT TGACCGAACT CGATGAGATG GAGAGAAAGA TCCAACTGGA TGCCTTAGCC CTATCCGTCG GCGTAACCAT AATTGGCTTT TCAAGCTATT CAATCTTGGC TAAAAATGGC ATTCTTCCGG AGCTGAACTC CGCCTACCTG ATAGCACTGA TGGCATTAAC CTATATCGCG GGCATCATCA GTGGCCGCCT AAGATACAGT TGA
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Protein sequence | MKSIFNALCS KGLPARDLKN ANRVNLLAVL WALSLLVGSL LSQYYSLSVL VISLAFITHT VIGIAMVFAY KRYLTELDEM ERKIQLDALA LSVGVTIIGF SSYSILAKNG ILPELNSAYL IALMALTYIA GIISGRLRYS
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