Gene Ssed_4363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_4363 
Symbol 
ID5610942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp5340810 
End bp5341232 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content47% 
IMG OID640935333 
Producthypothetical protein 
Protein accessionYP_001476093 
Protein GI157377493 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGTA TTTTCAATGC ACTCTGCTCC AAGGGGCTAC CGGCAAGAGA TCTGAAGAAT 
GCCAACCGAG TTAACTTGCT TGCTGTACTT TGGGCACTAT CACTCTTGGT CGGCTCACTG
CTGTCCCAAT ACTATTCTTT ATCCGTCTTG GTAATCAGCC TCGCATTCAT CACTCACACT
GTCATAGGCA TTGCCATGGT GTTTGCCTAC AAACGATACT TGACCGAACT CGATGAGATG
GAGAGAAAGA TCCAACTGGA TGCCTTAGCC CTATCCGTCG GCGTAACCAT AATTGGCTTT
TCAAGCTATT CAATCTTGGC TAAAAATGGC ATTCTTCCGG AGCTGAACTC CGCCTACCTG
ATAGCACTGA TGGCATTAAC CTATATCGCG GGCATCATCA GTGGCCGCCT AAGATACAGT
TGA
 
Protein sequence
MKSIFNALCS KGLPARDLKN ANRVNLLAVL WALSLLVGSL LSQYYSLSVL VISLAFITHT 
VIGIAMVFAY KRYLTELDEM ERKIQLDALA LSVGVTIIGF SSYSILAKNG ILPELNSAYL
IALMALTYIA GIISGRLRYS