6 homologs were found in PanDaTox collection
for query gene CPS_1160 on replicon NC_003910
Organism: Colwellia psychrerythraea 34H



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_003910  CPS_1160  hypothetical protein  100 
 
 
140 aa  290  4e-78  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_3409  hypothetical protein  48.15 
 
 
138 aa  133  7.000000000000001e-31  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_0139  hypothetical protein  32.28 
 
 
140 aa  63.5  0.0000000009  Shewanella pealeana ATCC 700345  Bacteria  normal  0.130279  n/a   
 
 
-
 
NC_010506  Swoo_4744  hypothetical protein  30.77 
 
 
140 aa  62  0.000000002  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.152397 
 
 
-
 
NC_009831  Ssed_4363  hypothetical protein  34.69 
 
 
140 aa  56.2  0.0000002  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_3626  hypothetical protein  31.91 
 
 
141 aa  52.4  0.000002  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>