Gene Shew_3626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_3626 
Symbol 
ID4922379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp4326037 
End bp4326462 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content57% 
IMG OID640165248 
Producthypothetical protein 
Protein accessionYP_001095751 
Protein GI127514554 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGA TCATCGACGC CATCTGCTCC AGAGGGCTAC CGTCAAGGGA TATTCAAAAT 
GCTAACCGGG TGAACCTGCT CGCCCTGCTG TGGGCGCTGA GCCTGGGCGG CACCTCATTC
CTTGCCCACC AAGGCTATCT GGCCAGCACC TGGGTCGTGG TAAGCTGCTT CATCCTCCAT
GGCGCCATCG GCATCTGGAT GCTGTTGGCC TTCAAACGCT TCCTGCGCCA ACTCGACGAG
ATGGAGCGCA AGATACAGCT AGATGCCCTG GCCTTGGCCG TCGGCGTCAG CATCATAGGT
TTCTCCCTCT ACTCGATTCT AGATCTGGCA GACTTGCTGC CGGATCTTAA GGCGGCCTAT
CTGGTGGTGC TGCTGGCGCT CACCTATATG CTGGGGATCA TCTTCGGGAG ACTGAGCTAC
AGATGA
 
Protein sequence
MKQIIDAICS RGLPSRDIQN ANRVNLLALL WALSLGGTSF LAHQGYLAST WVVVSCFILH 
GAIGIWMLLA FKRFLRQLDE MERKIQLDAL ALAVGVSIIG FSLYSILDLA DLLPDLKAAY
LVVLLALTYM LGIIFGRLSY R