7 homologs were found in PanDaTox collection
for query gene Sfri_1901 on replicon NC_008345
Organism: Shewanella frigidimarina NCIMB 400



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008228  Patl_0778  transmembrane prediction  64.73 
 
 		 574 aa  741    Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.00747802  n/a   
 
 
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NC_008345  Sfri_1901  putative nucleoside transport protein  100 
 
 		 578 aa  1173    Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_012560  Avin_26970  hypothetical protein-transmembrane prediction  65.68 
 
 		 593 aa  749    Azotobacter vinelandii DJ  Bacteria  normal  0.65165  n/a   
 
 
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NC_011138  MADE_01745  hypothetical protein  64.25 
 
 		 432 aa  555  1e-157  Alteromonas macleodii 'Deep ecotype'  Bacteria  hitchhiker  0.000173676  n/a   
 
 
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NC_013501  Rmar_0690  transmembrane prediction  39.39 
 
 		 471 aa  299  9e-80  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
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NC_010571  Oter_1348  transmembrane prediction  35.95 
 
 		 460 aa  270  5.9999999999999995e-71  Opitutus terrae PB90-1  Bacteria  normal  0.203481  normal  1 
 
 
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NC_011138  MADE_02311  hypothetical protein  71.63 
 
 		 173 aa  181  2.9999999999999997e-44  Alteromonas macleodii 'Deep ecotype'  Bacteria  unclonable  0.00000119762  n/a   
 
 
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