| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0778 |
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| Symbol | |
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| ID | 4174112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 893269 |
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| End bp | 894993 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638053780 |
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| Product | transmembrane prediction |
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| Protein accession | YP_660360 |
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| Protein GI | 109897105 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1457] Purine-cytosine permease and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00747802 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGTCTC AAACGCATAA CAGCAGTATC GGGAATATTA GCGAAGAACA GCTACCTATT
CCCAAGCATA AATTAAAGGG TTGGACCCAT TTTTTAGGTC TGTACGCTGG TGAGCATGTT
GCCGCGACGG AATTCGTCTT CGGCGCAACG TTTGTGGCAC TTGGCGCCAC CATGACCGAC
ATCTTACTAG GCTTGTTAAT TGGTAATATT TTAGCGGTAC TAAGCTGGAC CTTCATTACT
ACGCCCATCG CGGTTGAAAC TCGATTAAGC CTATACACTT ACCTGCAAAA AATTGCTGGT
GACTCGATGA CTAAGCTCTA CAATTGGGCG AATGTTATTA TTTTTACTGT TATATCCGCT
GCCATGATTA CGGTCTCGGC GACGGCAGTG CGCTTCGCCT TTGATATTCC AGCTCAGCTC
AATTGGTATC CCACCAATGC TTGGTTTGTG GCTATCGTCT TAGCGGTGGG GATTATCGTG
GTGCTGGTGG CTATGTATGG CTTTACCGCA GTATCCAATT TCTCTGGCAT TTGTGCGCCA
TGGTTGCTTG TCATGTTTGT GAGTGGCCCA TTGATTTTGA TGCCCGCTTT GGCAGACTCT
GTTATTGGCC AAACCGGACT CAGTAGTTGG TCTGATTTCA TGCACATAGG TAGTATTTCC
GTTTGGACGG GCCTAGACGC CAACGGTGAG CCTGGTATTG GTCTGTTAGA AGTCATTGGC
TTTTCTTGGG CTGCCAACAC AATCACCCAC TTCGGCTTGA TTGATATGGC TATTTTACGC
TACGCCCGCA AGCGCTCGTA CGGTGTGTGC ACCTCGGCCG GCATGTTATT TGGTCACTAT
ATCGCGTGGA TTTCTGCTGG TATCATGGGT GCAGGCACAG CGGTTATCGT GCAAAAATCG
ATTGTGGAAT TAGACCCAGG TGACGTGGCA TACCAAGCAC TAGGTTTATC CGGTTTGGTG
ATTGTTATTG TCGCGGGGTG GACCACAGCG AACGCGAACC TGTATCGTGC TGGCTTGGCT
GCTCAAGCCA TTTTCAAAAA CCATTCACGT ACCAAAACGA CCTTAACCGT AGGTCTGGTC
ACTGTGTGTG TGGCATGTTT TCCTTTCGTG TTTACCAAGC TTTTGCCTTT ATTAACCTAT
GCCGGTTTAT TGGTGGTGCC AGTAGGTGCC ATCGTATTTG CTGAGCACTT TATCTTCCCG
CGTATTGGTT ATACGCGTTA CTGGGTGGCA TATCGTCAGC TTACGCATAG CAGACCAGCT
GTTGTGGCTT GGGGCTTAGG TTTAGCGTTT GGTTTTGGCT TAAATGCGTT GGATGTTTTG
TCTTTTTATT ACCTGTTTAT ACCAACGTGG TTCTTCACCA TCTTTGTGTA TACCGTGATG
GCAAAACGTC ATGGTGCGGC TGAAGCGTAC CCAGAAGAGC AAGCACAAAT GGAAGCATTC
AACCAACGTG TTGAGCTTCA TCAAGAAGAG CAGGCTCGAA ACGAACCTGA CCCTGTTATA
CATATATCAA AATTAACCCA GTCACTGCGT GTGATATCGA TTGCCAGCTT AATTGTTACG
TTTGCGTTGG CGTGTAACAC CATGTTTTTC AGTGCCGACA TTTCTGGCTA CGAAGTGAAC
AGAGACATGT TTTTCAATGT CGGTTTTGCT TGCACACTTA TTTACTTTTT CACCGCTTAT
TGGGCCATGC AGCGTAAAAA AATAGCTGTC GGCGCCAACG TTTAG
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| Protein sequence | MTSQTHNSSI GNISEEQLPI PKHKLKGWTH FLGLYAGEHV AATEFVFGAT FVALGATMTD
ILLGLLIGNI LAVLSWTFIT TPIAVETRLS LYTYLQKIAG DSMTKLYNWA NVIIFTVISA
AMITVSATAV RFAFDIPAQL NWYPTNAWFV AIVLAVGIIV VLVAMYGFTA VSNFSGICAP
WLLVMFVSGP LILMPALADS VIGQTGLSSW SDFMHIGSIS VWTGLDANGE PGIGLLEVIG
FSWAANTITH FGLIDMAILR YARKRSYGVC TSAGMLFGHY IAWISAGIMG AGTAVIVQKS
IVELDPGDVA YQALGLSGLV IVIVAGWTTA NANLYRAGLA AQAIFKNHSR TKTTLTVGLV
TVCVACFPFV FTKLLPLLTY AGLLVVPVGA IVFAEHFIFP RIGYTRYWVA YRQLTHSRPA
VVAWGLGLAF GFGLNALDVL SFYYLFIPTW FFTIFVYTVM AKRHGAAEAY PEEQAQMEAF
NQRVELHQEE QARNEPDPVI HISKLTQSLR VISIASLIVT FALACNTMFF SADISGYEVN
RDMFFNVGFA CTLIYFFTAY WAMQRKKIAV GANV
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