| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1901 |
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| Symbol | |
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| ID | 4278813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2250689 |
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| End bp | 2252425 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638134685 |
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| Product | putative nucleoside transport protein |
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| Protein accession | YP_750585 |
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| Protein GI | 114563072 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1457] Purine-cytosine permease and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAATAA GTCAACATGA GGCTTCATTC AAACAAACGA ATGAAGAGCA GCTGCCTGTA
GCTAAAAATA AATTACATGG TTGGAAACAC TTTGCAGGTT TATATGCTGG GGAGCATGTT
GCCGCGACAG AGTTCGTTAT TGGTGCCACT TTTGTTGCTC TAGGTGCCTC AACCATTGAT
ATATTACTTG GACTATTAAT TGGTAATCTA TTGGCGATGT GTTCGTGGTG GTTATTAACG
GCACCGATTG CTGTTGAAAC TCGACTCAGT TTATATAACT ATTTAAATAA GATTGCTGGC
GACTCGATGA CCAAGCTCTA TAACTGGGCT AATGTGATTA TCTTCTCGGT GATATCCGCA
GCGATGATCA CAGTATCGTC CACAGCCGTT CGTTTCTTAT TCGACATTCC GGCACAATTA
AATTGGTATC CCAGTAGTCT ATGGTTTGTG ATGATAGTAT TAGCGGTAGG ATCTATCGTC
GTTGTGGTTG CCATGTATGG TTTCTCGACC GTGGCTGACT TTTCTAAAAT TTGTGCGCCG
TGGTTATTTG TTATCTTTAT TGCGGGTTCA TTTACCTTAT TCCCAGTGTT ATCAAATCAT
GTTATTGGCA GTACCACATT AACGGGCTGG CAAGACTTCA TGACCATAGG TGACAGCTCA
ATTTGGACTG GATTAAATGA CAAAGGTGAA CCCGGTATCG GTTTACTTGA AGTGATAGGC
TTTGCGTGGG CCGCTAACTC AATTACTCAC TTCGGTTTGA TTGACATGGC TATTTTCCGC
TTCGCAAAGC GTAAAAGTTA TGGTTTGATT TCAGGTGTTG GTATGTTCTT CGGCCACTAC
TTAGCATGGA TTTCTGCTGG TATTATGGGG GCAGGTACCG CTGTACTATT AAAAACCACT
ATTACCCAAC TCGATCCAGG TGATGTTGCT TACCATGCCT TAGGTTTTTC AGGCTTTGTG
ATTATCATTA TCGCTGGTTG GACAACGGCT AACGCCAATT TATACCGTGC AGGCCTTGCC
GCGCAGTCAA TATTTGTTAA TCATTCTCGT GAACGTACCA CCGCCATAGT GGGCTTAGTC
ACTGTCGTGA TAGCGTGTTT CCCATTTGTG TTTTCGCAGA TGTTACCGTT ACTGACGTAT
GCCGGTCTTT TAGTTGTACC AGTGGGTGGT ATTGTATTTG CTGAGCACGT GTTATTCCCT
AAGATTGGCT TAACCCGCTA TTGGGCTAAA TATCAAAAAC TGTCAAAAAG CACACCGGCA
ATTGCATCTT GGGCATTAGC GTTAGTATTT GGGTTTGGTT TAAATAGTCT TGATATTATT
TCATTCTATT ACTTATTTAT TCCAACGTGG ATATTCACCA TTATAATTTA TACCGTATTA
GCTAAAAAGT ATGGTGCCGA TTTAGATTAT ACAGGTGCTA TATTATTAGA TGAGAAAGAA
CAGCAACAAA TAACAGAGTA TCAAGATGAA ATGGCTAAAG ACGATAAGCC TCATGTTGAA
GATGGCAGCA AACTCACTAA GTTATTAAAT AGCTTCGCGG TGATCTCTTT GATGGTTATT
AGCATACTGG CTGCGAAAGT GATGTTTTAT AGCCCAACAA TGACAATCTA TGCAGAGAAT
AAGTCTTTAT TTGAAACGGT TTGTTTTGTT TGTACGATAA TTTATTTTAG TTGTTCATAC
ATTGCTCTGA AACTGAGGGA TCCCCACGAA TTTAATAGCA TGCTTGTGGG TCCTTGA
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| Protein sequence | MTISQHEASF KQTNEEQLPV AKNKLHGWKH FAGLYAGEHV AATEFVIGAT FVALGASTID
ILLGLLIGNL LAMCSWWLLT APIAVETRLS LYNYLNKIAG DSMTKLYNWA NVIIFSVISA
AMITVSSTAV RFLFDIPAQL NWYPSSLWFV MIVLAVGSIV VVVAMYGFST VADFSKICAP
WLFVIFIAGS FTLFPVLSNH VIGSTTLTGW QDFMTIGDSS IWTGLNDKGE PGIGLLEVIG
FAWAANSITH FGLIDMAIFR FAKRKSYGLI SGVGMFFGHY LAWISAGIMG AGTAVLLKTT
ITQLDPGDVA YHALGFSGFV IIIIAGWTTA NANLYRAGLA AQSIFVNHSR ERTTAIVGLV
TVVIACFPFV FSQMLPLLTY AGLLVVPVGG IVFAEHVLFP KIGLTRYWAK YQKLSKSTPA
IASWALALVF GFGLNSLDII SFYYLFIPTW IFTIIIYTVL AKKYGADLDY TGAILLDEKE
QQQITEYQDE MAKDDKPHVE DGSKLTKLLN SFAVISLMVI SILAAKVMFY SPTMTIYAEN
KSLFETVCFV CTIIYFSCSY IALKLRDPHE FNSMLVGP
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