12 homologs were found in PanDaTox collection
for query gene Sden_0205 on replicon NC_007954
Organism: Shewanella denitrificans OS217



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007954  Sden_0205  glycosyl transferase family protein  100 
 
 
251 aa  528  1e-149  Shewanella denitrificans OS217  Bacteria  normal  0.391854  n/a   
 
 
-
 
NC_009831  Ssed_0110  glycosyl transferase family protein  78.09 
 
 
251 aa  422  1e-117  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_0073  glycosyl transferase family protein  78.49 
 
 
251 aa  422  1e-117  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.131327 
 
 
-
 
NC_009052  Sbal_0065  glycosyl transferase family protein  60.56 
 
 
249 aa  319  1.9999999999999998e-86  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0533  hypothetical protein  37.15 
 
 
257 aa  158  6e-38  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_4939  hypothetical protein  37.99 
 
 
257 aa  154  1e-36  Pseudomonas putida KT2440  Bacteria  normal  0.465447  normal 
 
 
-
 
NC_009512  Pput_4811  hypothetical protein  37.99 
 
 
257 aa  154  2e-36  Pseudomonas putida F1  Bacteria  normal  0.634569  normal 
 
 
-
 
NC_010501  PputW619_0529  hypothetical protein  39.15 
 
 
257 aa  153  2.9999999999999998e-36  Pseudomonas putida W619  Bacteria  normal  normal  0.103577 
 
 
-
 
NC_010322  PputGB1_4988  hypothetical protein  37.55 
 
 
257 aa  149  4e-35  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_4987  hypothetical protein  37.22 
 
 
245 aa  143  2e-33  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.613589  n/a   
 
 
-
 
NC_007969  Pcryo_1177  hypothetical protein  24.32 
 
 
229 aa  62.8  0.000000005  Psychrobacter cryohalolentis K5  Bacteria  normal  hitchhiker  0.00034151 
 
 
-
 
NC_010681  Bphyt_2252  glycosyl transferase family 2  27.37 
 
 
360 aa  43.5  0.003  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
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