11 homologs were found in PanDaTox collection
for query gene Psyr_0533 on replicon NC_007005
Organism: Pseudomonas syringae pv. syringae B728a



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007005  Psyr_0533  hypothetical protein  100 
 
 
257 aa  539  9.999999999999999e-153  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_4987  hypothetical protein  92.24 
 
 
245 aa  448  1e-125  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.613589  n/a   
 
 
-
 
NC_010501  PputW619_0529  hypothetical protein  59.84 
 
 
257 aa  325  3e-88  Pseudomonas putida W619  Bacteria  normal  normal  0.103577 
 
 
-
 
NC_002947  PP_4939  hypothetical protein  58.63 
 
 
257 aa  321  9.000000000000001e-87  Pseudomonas putida KT2440  Bacteria  normal  0.465447  normal 
 
 
-
 
NC_009512  Pput_4811  hypothetical protein  58.63 
 
 
257 aa  320  9.999999999999999e-87  Pseudomonas putida F1  Bacteria  normal  0.634569  normal 
 
 
-
 
NC_010322  PputGB1_4988  hypothetical protein  59.04 
 
 
257 aa  320  1.9999999999999998e-86  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_0110  glycosyl transferase family protein  38.74 
 
 
251 aa  163  3e-39  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_0073  glycosyl transferase family protein  38.67 
 
 
251 aa  162  4.0000000000000004e-39  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.131327 
 
 
-
 
NC_007954  Sden_0205  glycosyl transferase family protein  37.15 
 
 
251 aa  161  1e-38  Shewanella denitrificans OS217  Bacteria  normal  0.391854  n/a   
 
 
-
 
NC_009052  Sbal_0065  glycosyl transferase family protein  38.25 
 
 
249 aa  157  2e-37  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_007969  Pcryo_1177  hypothetical protein  25.12 
 
 
229 aa  79.7  0.00000000000004  Psychrobacter cryohalolentis K5  Bacteria  normal  hitchhiker  0.00034151 
 
 
-
 
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