Gene PputGB1_4988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4988 
Symbol 
ID5872803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5565393 
End bp5566166 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content57% 
IMG OID641550126 
Producthypothetical protein 
Protein accessionYP_001671208 
Protein GI167035977 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCTTTT CAAATGAGAG TGACGTCACG CTCGTCGTGA CCAGTTGTGG GCGGTTCGAT 
CTGCTCAAAG ACACCCTTGA GAGTTTCGAT CGCTACAACA CCGCGCCCAT TCGCGAGGTA
TTCATCACCG AAGATTCCGG TGACGATGCC GTGCATGCCG CTGTGCCGGA GCACTGGAAG
CCGTACTGCA AGGTGTTCGT CAATCGCCCC AAGCTTGGCC AATTGCCGTC TATCGACCTG
GCTTACAGCC ACGTCAAGAC GCCGTACATC TTTCACTGCG AAGACGACTG GCATTTCTAC
CGCCAAGGCT TCGTCGAAGA CTCGCGGGCC ATTCTGGAGG TCAGCCCCAA CCTGTTGCAG
GTGTGGCTGC GCAGCCATGC CCACGACCTG GCTATCCACA GCCCGTACAT CCACCTGGGT
GATCGCCAGG TGATCGCCGG CGTGCCGTGT TATCCGCTGC TTTCCGAAAA AGCCGAATGG
CAGGCATTCT CGCTCAATCC TGGCCTGCGT CGCTTGAGCG ATTACCAGCG CTGCGCGCCA
TTTGCCGCCT ATGCTGGAGA GAAGGCGCTT TCCCGACGCT ACGCTGAGTT AAATCTGACA
GCGGTCACCT TGGAGGGTGA TGCAGTCTTG CACACAGGAT TCGGTAATCA CGTGACCTTG
CCCATTGAAG TGGAGCGTAA GGCCAAGCGT CGTCAACGTG ATCGGATAAA GCTGGCATTG
ACGCTGGTGA CGGGTGCCTT GATCGGCATG GGTATCACCA TTTTTGTTCA ATGA
 
Protein sequence
MRFSNESDVT LVVTSCGRFD LLKDTLESFD RYNTAPIREV FITEDSGDDA VHAAVPEHWK 
PYCKVFVNRP KLGQLPSIDL AYSHVKTPYI FHCEDDWHFY RQGFVEDSRA ILEVSPNLLQ
VWLRSHAHDL AIHSPYIHLG DRQVIAGVPC YPLLSEKAEW QAFSLNPGLR RLSDYQRCAP
FAAYAGEKAL SRRYAELNLT AVTLEGDAVL HTGFGNHVTL PIEVERKAKR RQRDRIKLAL
TLVTGALIGM GITIFVQ