10 homologs were found in PanDaTox collection
for query gene Sbal223_1077 on replicon NC_011663
Organism: Shewanella baltica OS223



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009665  Shew185_3332  major facilitator transporter  99.53 
 
 
429 aa  846    Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_1077  major facilitator transporter  100 
 
 
429 aa  850    Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.00530736 
 
 
-
 
NC_008228  Patl_2680  major facilitator transporter  36.18 
 
 
475 aa  267  4e-70  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_0685  Na+/melibiose symporter and related transporters-like  31.42 
 
 
455 aa  215  9.999999999999999e-55  Saccharophagus degradans 2-40  Bacteria  normal  hitchhiker  0.000000328828 
 
 
-
 
NC_010571  Oter_2049  Na+/melibiose symporter and related transporters-like protein  30.68 
 
 
469 aa  184  3e-45  Opitutus terrae PB90-1  Bacteria  normal  0.962314  normal  0.648168 
 
 
-
 
NC_003910  CPS_3738  hypothetical protein  23.11 
 
 
467 aa  70.5  0.00000000005  Colwellia psychrerythraea 34H  Bacteria  unclonable  0.00183877  n/a   
 
 
-
 
NC_010506  Swoo_4367  major facilitator transporter  23.67 
 
 
493 aa  64.3  0.000000004  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_2315  hypothetical protein  25.75 
 
 
511 aa  58.5  0.0000002  Opitutus terrae PB90-1  Bacteria  normal  0.276879  normal  0.0219591 
 
 
-
 
NC_008347  Mmar10_0248  major facilitator transporter  26.04 
 
 
486 aa  52.8  0.00001  Maricaulis maris MCS10  Bacteria  normal  0.135747  normal 
 
 
-
 
NC_010571  Oter_4221  major facilitator transporter  20.92 
 
 
472 aa  43.9  0.006  Opitutus terrae PB90-1  Bacteria  normal  0.218171  normal  0.657626 
 
 
-
 
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