Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_2315 |
Symbol | |
ID | 6207243 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 2988159 |
End bp | 2989694 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641691970 |
Product | hypothetical protein |
Protein accession | YP_001819197 |
Protein GI | 182414131 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2211] Na+/melibiose symporter and related transporters |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.276879 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0219591 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAAGAAA ACCCCTCGGT TCAGGCCTCC ACCGTCACGG CTCATGCCGA CAAAGTGCCG GTGCCCCAGA AACTCGCCTA CGGACTCGGC ACCTTCCACG ACATGTGGGG CCACTGGCTT TACCCGAACA TCGGATTTCA GGTTTTCAAT ATTTTCCTGG GCGTGGCGCC GTGGCTCATC GGGGTGGCGC TGTTTGCGAA CCGCGTGTTC GATGCGATCG CGGATCCGCT CTTCGGCTGG CTGTCGGACA ACACGCGCAC GCGCTGGGGC CGGCGCCGGC CCTACATCCT GATCGCGGGC GTCATCGGCG GGCTGTGTTT TCCGCTGCTG GTGGCGGTCG GGCCGGGGTG GGGCACGACG ACGATCTTCG GCCGCGAAAT CTCGAACTAC TTCTGGTTCA TGATCGGCTC GTCGGCGCTG TTTCTGCCGA TCATGAGCGC GTTCAAGGTG CCCTACGACT GCATGGGCGC GGAGATGACG CCCGACTACA ACGAGCGCAC CAGTGTGTGG TCGTTCCGCA ACGGCGTGCA GAAGTTCGCC GAGCTCGGGC TGTTCTTCGG CGCACAGTTC ATGACGATGG CGGTGTGGGT GGGCGCCACG AACGAGAACG TCTGGGCGCG CATCAAGCAG CTGCTGACCT CCGCCACCGC GTGGAAGGCG GCGCCCGAAG GCACCCTGCC GAACATCCTG CTCGGCGCGC AGGTTTACTG CACGGTGCTG GGCGTGCTGA TGGCGATCGC ATCGGTGGTC ATGTTCTTCA CCATCCGCGA GCGCTACTAC GGCAATCTCG CCAGCAAGCA GGACAAGGTG AAGCTGATCG ATACGCTCGG AATGACGTTG AAGTGCCGGC CGTTCCGGAT GCAGCTGCTG ATGAAGATGC CGTATGCGAT GGGCACGAGC ATGGTGGGCG CGCTGGGCTA CTACGACACG GTCTACTACG TCTGCCGCGG CAATCTGGGC GAAGGCGCGG TATGGAATTT TCGGATGGGC ATCGCCGGCA TGGTGTTCGG GTTTCTGGGC ATTCCGGTGT TCTCGTACAT CGCGCGCCGG CTGGGCAAAC GCCATGGCGT GATGGCGGTC CTCATCGCCG CATTGTTCGT CTTCGCGGCC ACCTGGTGGC TGTATAATCC GGACATCAAG TGGCTGCAGA TTTTCGCGAC CGGGTTGATC GCGTTCACCG GCGCCGGATT CTGGATGCTC GACGGCGCGA TCGGCGGCGA CGTGATCGAC TACGATGAAC TGGAAACCGG CAAGCGGCGT GAAGGCGCGT TCACTGCGTG CGGCTCGTGG ATCATGAAAG TGGGCATGGC GCTCGGCGCC GGCGCGTCCG GCGTGATCCT GAGCGTCACC GGCTTCGACG CCGCGCTGGG TGGCGGGCAG ACGGAACACA CGTTGTTCAT GATCCGCTTC CTGCTCGCGG TGGTGCCGAT CGCCGGCATT CTCCTGGCGC TGGTGATGAT TTATTTCTTC CCGCTCACGC CGGAGAAGAT GGCGGAGATC CGTCAGCAGC TCGAGGTACG CCGCGGAAAG GTCTGA
|
Protein sequence | MQENPSVQAS TVTAHADKVP VPQKLAYGLG TFHDMWGHWL YPNIGFQVFN IFLGVAPWLI GVALFANRVF DAIADPLFGW LSDNTRTRWG RRRPYILIAG VIGGLCFPLL VAVGPGWGTT TIFGREISNY FWFMIGSSAL FLPIMSAFKV PYDCMGAEMT PDYNERTSVW SFRNGVQKFA ELGLFFGAQF MTMAVWVGAT NENVWARIKQ LLTSATAWKA APEGTLPNIL LGAQVYCTVL GVLMAIASVV MFFTIRERYY GNLASKQDKV KLIDTLGMTL KCRPFRMQLL MKMPYAMGTS MVGALGYYDT VYYVCRGNLG EGAVWNFRMG IAGMVFGFLG IPVFSYIARR LGKRHGVMAV LIAALFVFAA TWWLYNPDIK WLQIFATGLI AFTGAGFWML DGAIGGDVID YDELETGKRR EGAFTACGSW IMKVGMALGA GASGVILSVT GFDAALGGGQ TEHTLFMIRF LLAVVPIAGI LLALVMIYFF PLTPEKMAEI RQQLEVRRGK V
|
| |