Gene Oter_2315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_2315 
Symbol 
ID6207243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp2988159 
End bp2989694 
Gene Length1536 bp 
Protein Length511 aa 
Translation table11 
GC content63% 
IMG OID641691970 
Producthypothetical protein 
Protein accessionYP_001819197 
Protein GI182414131 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2211] Na+/melibiose symporter and related transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.276879 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0219591 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGAAA ACCCCTCGGT TCAGGCCTCC ACCGTCACGG CTCATGCCGA CAAAGTGCCG 
GTGCCCCAGA AACTCGCCTA CGGACTCGGC ACCTTCCACG ACATGTGGGG CCACTGGCTT
TACCCGAACA TCGGATTTCA GGTTTTCAAT ATTTTCCTGG GCGTGGCGCC GTGGCTCATC
GGGGTGGCGC TGTTTGCGAA CCGCGTGTTC GATGCGATCG CGGATCCGCT CTTCGGCTGG
CTGTCGGACA ACACGCGCAC GCGCTGGGGC CGGCGCCGGC CCTACATCCT GATCGCGGGC
GTCATCGGCG GGCTGTGTTT TCCGCTGCTG GTGGCGGTCG GGCCGGGGTG GGGCACGACG
ACGATCTTCG GCCGCGAAAT CTCGAACTAC TTCTGGTTCA TGATCGGCTC GTCGGCGCTG
TTTCTGCCGA TCATGAGCGC GTTCAAGGTG CCCTACGACT GCATGGGCGC GGAGATGACG
CCCGACTACA ACGAGCGCAC CAGTGTGTGG TCGTTCCGCA ACGGCGTGCA GAAGTTCGCC
GAGCTCGGGC TGTTCTTCGG CGCACAGTTC ATGACGATGG CGGTGTGGGT GGGCGCCACG
AACGAGAACG TCTGGGCGCG CATCAAGCAG CTGCTGACCT CCGCCACCGC GTGGAAGGCG
GCGCCCGAAG GCACCCTGCC GAACATCCTG CTCGGCGCGC AGGTTTACTG CACGGTGCTG
GGCGTGCTGA TGGCGATCGC ATCGGTGGTC ATGTTCTTCA CCATCCGCGA GCGCTACTAC
GGCAATCTCG CCAGCAAGCA GGACAAGGTG AAGCTGATCG ATACGCTCGG AATGACGTTG
AAGTGCCGGC CGTTCCGGAT GCAGCTGCTG ATGAAGATGC CGTATGCGAT GGGCACGAGC
ATGGTGGGCG CGCTGGGCTA CTACGACACG GTCTACTACG TCTGCCGCGG CAATCTGGGC
GAAGGCGCGG TATGGAATTT TCGGATGGGC ATCGCCGGCA TGGTGTTCGG GTTTCTGGGC
ATTCCGGTGT TCTCGTACAT CGCGCGCCGG CTGGGCAAAC GCCATGGCGT GATGGCGGTC
CTCATCGCCG CATTGTTCGT CTTCGCGGCC ACCTGGTGGC TGTATAATCC GGACATCAAG
TGGCTGCAGA TTTTCGCGAC CGGGTTGATC GCGTTCACCG GCGCCGGATT CTGGATGCTC
GACGGCGCGA TCGGCGGCGA CGTGATCGAC TACGATGAAC TGGAAACCGG CAAGCGGCGT
GAAGGCGCGT TCACTGCGTG CGGCTCGTGG ATCATGAAAG TGGGCATGGC GCTCGGCGCC
GGCGCGTCCG GCGTGATCCT GAGCGTCACC GGCTTCGACG CCGCGCTGGG TGGCGGGCAG
ACGGAACACA CGTTGTTCAT GATCCGCTTC CTGCTCGCGG TGGTGCCGAT CGCCGGCATT
CTCCTGGCGC TGGTGATGAT TTATTTCTTC CCGCTCACGC CGGAGAAGAT GGCGGAGATC
CGTCAGCAGC TCGAGGTACG CCGCGGAAAG GTCTGA
 
Protein sequence
MQENPSVQAS TVTAHADKVP VPQKLAYGLG TFHDMWGHWL YPNIGFQVFN IFLGVAPWLI 
GVALFANRVF DAIADPLFGW LSDNTRTRWG RRRPYILIAG VIGGLCFPLL VAVGPGWGTT
TIFGREISNY FWFMIGSSAL FLPIMSAFKV PYDCMGAEMT PDYNERTSVW SFRNGVQKFA
ELGLFFGAQF MTMAVWVGAT NENVWARIKQ LLTSATAWKA APEGTLPNIL LGAQVYCTVL
GVLMAIASVV MFFTIRERYY GNLASKQDKV KLIDTLGMTL KCRPFRMQLL MKMPYAMGTS
MVGALGYYDT VYYVCRGNLG EGAVWNFRMG IAGMVFGFLG IPVFSYIARR LGKRHGVMAV
LIAALFVFAA TWWLYNPDIK WLQIFATGLI AFTGAGFWML DGAIGGDVID YDELETGKRR
EGAFTACGSW IMKVGMALGA GASGVILSVT GFDAALGGGQ TEHTLFMIRF LLAVVPIAGI
LLALVMIYFF PLTPEKMAEI RQQLEVRRGK V