6 homologs were found in PanDaTox collection
for query gene Rpic12D_3036 on replicon NC_012856
Organism: Ralstonia pickettii 12D



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012856  Rpic12D_3036  Peptidoglycan-binding LysM  100 
 
 		 247 aa  506  1e-143  Ralstonia pickettii 12D  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008752  Aave_0037  peptidoglycan-binding LysM  53.23 
 
 		 247 aa  265  4e-70  Acidovorax citrulli AAC00-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010551  BamMC406_0633  peptidoglycan-binding LysM  54.55 
 
 		 246 aa  263  2e-69  Burkholderia ambifaria MC40-6  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011205  SeD_A1215  putative peptidoglycan-binding LysM  32.65 
 
 		 290 aa  123  2e-27  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  1  normal  0.195146 
 
 
-
 
NC_010682  Rpic_3383  hypothetical protein  92.59 
 
 		 44 aa  57  0.0000003  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011149  SeAg_B1091  hypothetical protein  32.93 
 
 		 170 aa  42.4  0.007  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  1  n/a   
 
 
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