Gene Aave_0037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0037 
Symbol 
ID4666263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp40951 
End bp41694 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content48% 
IMG OID639821253 
Productpeptidoglycan-binding LysM 
Protein accessionYP_968428 
Protein GI120608750 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATGATAA CGCAAGACTC TATGAAGACA GGATTTGAGA GGTGGCAGGA GGGCATAGAC 
AAAGCAGCGC AGGATGAGCG TTGGAATTAC TGGGATTGCG AGATCCAGGC GGCCGTCAAT
GAATACAACC AACACCTTGC CGGTATAGCA GGCTATATAC CCCTGGATTG GTATTTCATC
AAATCGATGG TTTGGGTGGA GACCGGTGCG AACAGTTCCG AATGGAAAAT CAAACCGATG
CAAATCGGCG TTCCCGGAGA CCCTGGAATG GCATCGCTTC TCAGTGGCAA CGAAGGCGGT
GATTTAATAT TACCACCCCA CTGGAAGTCC AAATTAACGC CGAATTCGAT CAGAACCATA
CCCCAGCATA ACCTTCGCGC AGGTATAGGT TATTTGCTGA TGAGGATGGG CAACTACGAA
TATCGTAGCC TGCCGAGTGC AGACGGAAAA CTCTATGAGG TCGTGGTCAG CCCGGGCGAC
AGTTTTGACA AGATCGCAAG AAAAAATGGC AGTACGGTGG AGACGATACG AAGGTTGAAT
CCACACATTT TGCTCTTGAG ACCTGGACAG ATGCTGAAAT ACCAGAAATC ATCAGTCCAG
CGAATTATCA GAAACTGGCG GATTCTGTCA ACCCAAATGG CAGCACAGAG ATACAATGGC
GGCGGTGATC CTAATTATGC AAGGAAACTT GACTATGTAT TACCCTTGCT GCGTAAAGGA
AAGGTAGCAG TATGCGAAAA ATAG
 
Protein sequence
MMITQDSMKT GFERWQEGID KAAQDERWNY WDCEIQAAVN EYNQHLAGIA GYIPLDWYFI 
KSMVWVETGA NSSEWKIKPM QIGVPGDPGM ASLLSGNEGG DLILPPHWKS KLTPNSIRTI
PQHNLRAGIG YLLMRMGNYE YRSLPSADGK LYEVVVSPGD SFDKIARKNG STVETIRRLN
PHILLLRPGQ MLKYQKSSVQ RIIRNWRILS TQMAAQRYNG GGDPNYARKL DYVLPLLRKG
KVAVCEK