Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0037 |
Symbol | |
ID | 4666263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 40951 |
End bp | 41694 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639821253 |
Product | peptidoglycan-binding LysM |
Protein accession | YP_968428 |
Protein GI | 120608750 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATGATAA CGCAAGACTC TATGAAGACA GGATTTGAGA GGTGGCAGGA GGGCATAGAC AAAGCAGCGC AGGATGAGCG TTGGAATTAC TGGGATTGCG AGATCCAGGC GGCCGTCAAT GAATACAACC AACACCTTGC CGGTATAGCA GGCTATATAC CCCTGGATTG GTATTTCATC AAATCGATGG TTTGGGTGGA GACCGGTGCG AACAGTTCCG AATGGAAAAT CAAACCGATG CAAATCGGCG TTCCCGGAGA CCCTGGAATG GCATCGCTTC TCAGTGGCAA CGAAGGCGGT GATTTAATAT TACCACCCCA CTGGAAGTCC AAATTAACGC CGAATTCGAT CAGAACCATA CCCCAGCATA ACCTTCGCGC AGGTATAGGT TATTTGCTGA TGAGGATGGG CAACTACGAA TATCGTAGCC TGCCGAGTGC AGACGGAAAA CTCTATGAGG TCGTGGTCAG CCCGGGCGAC AGTTTTGACA AGATCGCAAG AAAAAATGGC AGTACGGTGG AGACGATACG AAGGTTGAAT CCACACATTT TGCTCTTGAG ACCTGGACAG ATGCTGAAAT ACCAGAAATC ATCAGTCCAG CGAATTATCA GAAACTGGCG GATTCTGTCA ACCCAAATGG CAGCACAGAG ATACAATGGC GGCGGTGATC CTAATTATGC AAGGAAACTT GACTATGTAT TACCCTTGCT GCGTAAAGGA AAGGTAGCAG TATGCGAAAA ATAG
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Protein sequence | MMITQDSMKT GFERWQEGID KAAQDERWNY WDCEIQAAVN EYNQHLAGIA GYIPLDWYFI KSMVWVETGA NSSEWKIKPM QIGVPGDPGM ASLLSGNEGG DLILPPHWKS KLTPNSIRTI PQHNLRAGIG YLLMRMGNYE YRSLPSADGK LYEVVVSPGD SFDKIARKNG STVETIRRLN PHILLLRPGQ MLKYQKSSVQ RIIRNWRILS TQMAAQRYNG GGDPNYARKL DYVLPLLRKG KVAVCEK
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