| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0633 |
|---|
| Symbol | |
|---|
| ID | 6177991 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 711518 |
|---|
| End bp | 712258 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641680381 |
|---|
| Product | peptidoglycan-binding LysM |
|---|
| Protein accession | YP_001807346 |
|---|
| Protein GI | 172059694 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGTTC AAGCACCATC GAAGACAGGC TTCGAGAAAT GGCAGGACGG CATCGACAAG
GCGGTAGGCG ATACCAGATG GGATTCCTGG GATTGCGAAA TCCGGATGGC AGTCGACGAG
TACAACCGCC ATCTTTCCGG GATAGCAGGA TACAGGCCCT TGGATTGGCA GCTTATCAAG
GCGATGCTAT GGGTCGAATC TGGTGCGGCC GACTCGGAAT GGAACAGCAA GCCCATGCGC
ATCGGCGTTT CTGGCGATCC AGGGCTGGCA TCCCTGCTGT CGGGAAACGA AGGTGGCGAC
TTGATTCTGC CACCGGCCTG GAAGGGGCAG CTGACAATGG GGTCGGTCCG AAGCATGCCG
GCACATAACA TTCGTGCGGG GATCGGTTAC TTGCTGATGA AAACGGCCCA TTACGAGTAC
CGCAGCGTGT CGAACGCCGA TGTCAAAATC TATGAGGTCA TCGTTAAGCC CGGCGATAGC
CTCGACAAGA TTGCAAAAGC GCAAGCAAGC ACAGTAGATG CGCTGAGAAA GCTCAATCCG
ACCGCTACCG TTCTACGACC TGGGCAGGCG TTGAAGTATC AGAAAGCATC TGTGCAACGC
GTCATCACAA GCTGGCGGCA GATTTCCACA ACGTTGATAG CACAACGCTA TAACGGAGGA
GGCGATTTCA ATTATGCGGC AAAACTCGAC TATGCATTGA AGGCGATGCA GAAAAGGACG
GGCGCGATAT GTACAGAATA G
|
|---|
| Protein sequence | MAVQAPSKTG FEKWQDGIDK AVGDTRWDSW DCEIRMAVDE YNRHLSGIAG YRPLDWQLIK
AMLWVESGAA DSEWNSKPMR IGVSGDPGLA SLLSGNEGGD LILPPAWKGQ LTMGSVRSMP
AHNIRAGIGY LLMKTAHYEY RSVSNADVKI YEVIVKPGDS LDKIAKAQAS TVDALRKLNP
TATVLRPGQA LKYQKASVQR VITSWRQIST TLIAQRYNGG GDFNYAAKLD YALKAMQKRT
GAICTE
|
|---|
| |