8 homologs were found in PanDaTox collection
for query gene Rpal_4664 on replicon NC_011004
Organism: Rhodopseudomonas palustris TIE-1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011004  Rpal_4664  putative death on curing protein  100 
 
 
46 aa  93.2  1e-18  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1433  death-on-curing protein  71.74 
 
 
130 aa  73.2  0.000000000001  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_3971  death-on-curing protein  69.57 
 
 
130 aa  70.1  0.000000000009  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.0810167  normal  0.125734 
 
 
-
 
NC_007958  RPD_1413  death-on-curing protein  71.74 
 
 
130 aa  67.4  0.00000000006  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0387247  normal 
 
 
-
 
NC_010725  Mpop_2879  death-on-curing family protein  60 
 
 
137 aa  59.3  0.00000002  Methylobacterium populi BJ001  Bacteria  normal  0.0257036  normal 
 
 
-
 
NC_010172  Mext_2756  death-on-curing family protein  60 
 
 
137 aa  58.5  0.00000003  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_2983  death-on-curing family protein  48.89 
 
 
128 aa  50.1  0.00001  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.416848  normal  0.978544 
 
 
-
 
NC_009485  BBta_6860  putative death on curing protein  60.87 
 
 
95 aa  47.8  0.00005  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.60929  normal  0.300067 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>