Gene RPC_3971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3971 
Symbol 
ID3969394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4422010 
End bp4422402 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content61% 
IMG OID637927075 
Productdeath-on-curing protein 
Protein accessionYP_533816 
Protein GI90425446 
COG category[R] General function prediction only 
COG ID[COG3654] Prophage maintenance system killer protein 
TIGRFAM ID[TIGR01550] death-on-curing family protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0810167 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.125734 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGC CGAAAGAGCC GCTTTGGATC ACCTTCGAGC AGGCCATCGC GATTCACAGC 
CGCCAGTTGC GCCGCTTCGG CGGCGCTCCC GGTCTGCGCG ACGAAGGCAT GCTCCGATCG
GCGCTGGAGC GGCCCGTCAA CAAATGGCGC TATGAACAAT CGGAATTGCC GGAGCTTGCC
GCAGCGTATG CGTTCGGGTT GGCGAAGAAC CACGCATTTG TCGATGGCAA CAAGCGGATC
GCTTTTATGG CGATGACGGT CTTTCTTACC AAGAATGCCG TCGCTTTCGA TCCCGATCCC
GCTCAATCGA CGTCCATCAT CCTCTCGCTC GCCGCCGGCG AGGTCTCTGA GGAGAGCCTG
ACGCGCTGGA TCCGGGACAA TTGGCCGGCC TGA
 
Protein sequence
MSEPKEPLWI TFEQAIAIHS RQLRRFGGAP GLRDEGMLRS ALERPVNKWR YEQSELPELA 
AAYAFGLAKN HAFVDGNKRI AFMAMTVFLT KNAVAFDPDP AQSTSIILSL AAGEVSEESL
TRWIRDNWPA