8 homologs were found in PanDaTox collection
for query gene Rpal_0147 on replicon NC_011004
Organism: Rhodopseudomonas palustris TIE-1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011004  Rpal_0147  anti-sigma-factor antagonist  100 
 
 		 107 aa  217  3.9999999999999997e-56  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.817558  n/a   
 
 
-
 
NC_009485  BBta_7840  hypothetical protein  55.21 
 
 		 107 aa  103  7e-22  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0375531  normal  0.192756 
 
 
-
 
NC_007925  RPC_4678  anti-sigma-factor antagonist domain-containing protein  48.78 
 
 		 105 aa  85.9  2e-16  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010505  Mrad2831_4813  anti-sigma-factor antagonist  33.75 
 
 		 93 aa  47.4  0.00006  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  decreased coverage  0.000873285 
 
 
-
 
NC_010717  PXO_04746  stas domain, putative  29.47 
 
 		 109 aa  44.3  0.0006  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.428672  n/a   
 
 
-
 
NC_007643  Rru_A1397  Sulfate transporter/antisigma-factor antagonist STAS  35.87 
 
 		 111 aa  43.5  0.001  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.455344  n/a   
 
 
-
 
NC_011769  DvMF_0237  putative CheA signal transduction histidine kinase  35.16 
 
 		 669 aa  41.2  0.005  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.0874018 
 
 
-
 
NC_007519  Dde_1700  CheA signal transduction histidine kinase  35.96 
 
 		 596 aa  40  0.01  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.284072  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>