| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0147 |
|---|
| Symbol | |
|---|
| ID | 6407790 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 163700 |
|---|
| End bp | 164023 |
|---|
| Gene Length | 324 bp |
|---|
| Protein Length | 107 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642710056 |
|---|
| Product | anti-sigma-factor antagonist |
|---|
| Protein accession | YP_001989185 |
|---|
| Protein GI | 192288580 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.817558 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGTTCG ATCCCACCGA AGCGGGAGCC GCGCTTCGGC TTCCTTCCGA CTGTAGTATC
TCTTCCATCC GAAGTATCCA CGAGACGATC CAGGAAGCGC TCGGCCGCCA AGGTCCGCTG
GAGATCGACT GTTCAAAAGT GAACAGGGCC GATCTCACCT CGATCCAGCT TCTGCTGTCG
ACCGCCAAGA CCGGTGAGGC TCAGGGCCGC CCGGTTGTGC TGACAGAGCT CTCCGAGGTC
CTTCTCAACA CCATTCAGCG CGCCGGCTTC ACCGGCGACG AAATAATCGA CAAGCATTTC
CCGCAAAAGA AAGGTGGCTC GTAA
|
|---|
| Protein sequence | MTFDPTEAGA ALRLPSDCSI SSIRSIHETI QEALGRQGPL EIDCSKVNRA DLTSIQLLLS
TAKTGEAQGR PVVLTELSEV LLNTIQRAGF TGDEIIDKHF PQKKGGS
|
|---|
| |