7 homologs were found in PanDaTox collection
for query gene RoseRS_R0048 on replicon NC_009523
Organism: Roseiflexus sp. RS-1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009523  RoseRS_R0048    100 
 
 		 365 bp  724    Roseiflexus sp. RS-1  Bacteria  decreased coverage  0.0000306243  normal  0.0564215 
 
 
-
 
NC_009767  Rcas_R0018    95.62 
 
 		 367 bp  597  1e-169  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0712105  normal  0.309951 
 
 
-
 
NC_011831  Cagg_R0024    100 
 
 		 360 bp  67.9  0.000000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0122296  normal  1 
 
 
-
 
NC_013525  Tter_R0013    100 
 
 		 355 bp  63.9  0.00000003  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008709  Ping_R0075    100 
 
 		 351 bp  58  0.000002  Psychromonas ingrahamii 37  Bacteria  normal  1  normal  0.742864 
 
 
-
 
NC_010831  Cphamn1_R0045    93.94 
 
 		 403 bp  50.1  0.0004  Chlorobium phaeobacteroides BS1  Bacteria  normal  1  decreased coverage  0.0000694892 
 
 
-
 
NC_002967  TDE_tmRNA  10Sa RNA  91.67 
 
 		 351 bp  48.1  0.002  Treponema denticola ATCC 35405  Bacteria  hitchhiker  0.000526635  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>