5 homologs were found in PanDaTox collection
for query gene Rcas_3856 on replicon NC_009767
Organism: Roseiflexus castenholzii DSM 13941



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009767  Rcas_3856  hypothetical protein  100 
 
 
174 aa  357  6e-98  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.927601  normal 
 
 
-
 
NC_009523  RoseRS_1919  hypothetical protein  55.76 
 
 
187 aa  185  3e-46  Roseiflexus sp. RS-1  Bacteria  normal  hitchhiker  0.000709844 
 
 
-
 
NC_009380  Strop_0489  hypothetical protein  37.65 
 
 
148 aa  58.5  0.00000005  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_4105  leucine rich repeat variant  29.06 
 
 
759 aa  44.3  0.001  Cyanothece sp. PCC 7425  Bacteria  normal  0.381637  normal  0.334817 
 
 
-
 
NC_008553  Mthe_0150  leucine-rich repeat-containing protein  34.51 
 
 
295 aa  42  0.004  Methanosaeta thermophila PT  Archaea  normal  0.413974  n/a   
 
 
-
 
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