Gene Rcas_3856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3856 
Symbol 
ID5541360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp5040112 
End bp5040636 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content58% 
IMG OID640895966 
Producthypothetical protein 
Protein accessionYP_001433911 
Protein GI156743782 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.927601 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCCAT ATCACACGCC AAAAGAGTAT CTGGACGCCG CCAGATCGCC TGAGACCACG 
CCGGAAGAGT TGCGCCATCT GGCGATGTCG CCCTACGATT TCGTGGCGGT TGCAGTTGCA
CAGAATCCGA ACACTGAACC TGATGTGCTC ACAGCGCTGG TCCCCGCAAC CGTCACGTCG
TGGAACGATC AGGCGCTGGC GGCTGCCATC GCGCAACATC CCCACACGCC GGTCGAGGCG
CTGAAGATGC TGGCGGAACG ACTGACGCCA GTGCTGGATA ATGGTCGCAA TCATCAGATG
GGGTTCAAAG CGGGGGTTGC GTTATGCTGC AATCCGCACA CACCTTTTCA GGGTATTGCT
ACACTGCTAC GCTCTGATCG CGTCGCCATG CAGTTTCGCA AAGTAGTCGC CCGCGAAACG
CGCCGACGCG ACGTTCTGGA ACTCCTTGTG CGTGACCGCA GCGAAACGGT CAGGAGAAGT
GCGCAAAAAC GTATTGAGAC GCTTGATACA GAACCGGAAC ATTAG
 
Protein sequence
MPPYHTPKEY LDAARSPETT PEELRHLAMS PYDFVAVAVA QNPNTEPDVL TALVPATVTS 
WNDQALAAAI AQHPHTPVEA LKMLAERLTP VLDNGRNHQM GFKAGVALCC NPHTPFQGIA
TLLRSDRVAM QFRKVVARET RRRDVLELLV RDRSETVRRS AQKRIETLDT EPEH