Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3856 |
Symbol | |
ID | 5541360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 5040112 |
End bp | 5040636 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640895966 |
Product | hypothetical protein |
Protein accession | YP_001433911 |
Protein GI | 156743782 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.927601 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCCAT ATCACACGCC AAAAGAGTAT CTGGACGCCG CCAGATCGCC TGAGACCACG CCGGAAGAGT TGCGCCATCT GGCGATGTCG CCCTACGATT TCGTGGCGGT TGCAGTTGCA CAGAATCCGA ACACTGAACC TGATGTGCTC ACAGCGCTGG TCCCCGCAAC CGTCACGTCG TGGAACGATC AGGCGCTGGC GGCTGCCATC GCGCAACATC CCCACACGCC GGTCGAGGCG CTGAAGATGC TGGCGGAACG ACTGACGCCA GTGCTGGATA ATGGTCGCAA TCATCAGATG GGGTTCAAAG CGGGGGTTGC GTTATGCTGC AATCCGCACA CACCTTTTCA GGGTATTGCT ACACTGCTAC GCTCTGATCG CGTCGCCATG CAGTTTCGCA AAGTAGTCGC CCGCGAAACG CGCCGACGCG ACGTTCTGGA ACTCCTTGTG CGTGACCGCA GCGAAACGGT CAGGAGAAGT GCGCAAAAAC GTATTGAGAC GCTTGATACA GAACCGGAAC ATTAG
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Protein sequence | MPPYHTPKEY LDAARSPETT PEELRHLAMS PYDFVAVAVA QNPNTEPDVL TALVPATVTS WNDQALAAAI AQHPHTPVEA LKMLAERLTP VLDNGRNHQM GFKAGVALCC NPHTPFQGIA TLLRSDRVAM QFRKVVARET RRRDVLELLV RDRSETVRRS AQKRIETLDT EPEH
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