10 homologs were found in PanDaTox collection
for query gene RSc2487 on replicon NC_003295
Organism: Ralstonia solanacearum GMI1000



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_003295  RSc2487  hypothetical protein  100 
 
 		 68 aa  139  1.9999999999999998e-32  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007951  Bxe_A3655  hypothetical protein  58.33 
 
 		 80 aa  76.6  0.00000000000009  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010625  Bphy_5752  hypothetical protein  60 
 
 		 79 aa  73.9  0.0000000000007  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007614  Nmul_A0062  putative transcriptional regulator  53.33 
 
 		 84 aa  68.2  0.00000000003  Nitrosospira multiformis ATCC 25196  Bacteria  normal  1  n/a   
 
 
-
 
NC_007404  Tbd_2070  transcriptional regulator  50.82 
 
 		 74 aa  65.5  0.0000000003  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007404  Tbd_2004  transcriptional regulator  44.26 
 
 		 68 aa  59.7  0.00000001  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007949  Bpro_5085  putative transcriptional regulator  52.83 
 
 		 89 aa  57.8  0.00000005  Polaromonas sp. JS666  Bacteria  decreased coverage  0.0000000380445  normal  1 
 
 
-
 
NC_008782  Ajs_0929  phage transcriptional regulator, AlpA  42.62 
 
 		 78 aa  47.8  0.00005  Acidovorax sp. JS42  Bacteria  normal  1  hitchhiker  0.0000788728 
 
 
-
 
NC_011883  Ddes_1227  phage transcriptional regulator, AlpA  39.68 
 
 		 78 aa  46.2  0.0001  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.0127458  n/a   
 
 
-
 
NC_014148  Plim_2648  Prophage CP4-57 regulatory  40 
 
 		 93 aa  42  0.003  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.395704  n/a   
 
 
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