10 homologs were found in PanDaTox collection
for query gene Bpro_5085 on replicon NC_007949
Organism: Polaromonas sp. JS666



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007949  Bpro_5085  putative transcriptional regulator  100 
 
 
89 aa  183  7e-46  Polaromonas sp. JS666  Bacteria  decreased coverage  0.0000000380445  normal 
 
 
-
 
NC_007614  Nmul_A0062  putative transcriptional regulator  57.35 
 
 
84 aa  75.1  0.0000000000003  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_2070  transcriptional regulator  51.61 
 
 
74 aa  64.7  0.0000000004  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_0929  phage transcriptional regulator, AlpA  49.18 
 
 
78 aa  59.7  0.00000001  Acidovorax sp. JS42  Bacteria  normal  hitchhiker  0.0000788728 
 
 
-
 
NC_003295  RSc2487  hypothetical protein  52.83 
 
 
68 aa  57.8  0.00000005  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_2004  transcriptional regulator  44.07 
 
 
68 aa  53.9  0.0000007  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_5752  hypothetical protein  43.48 
 
 
79 aa  51.6  0.000003  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A3655  hypothetical protein  46.43 
 
 
80 aa  49.3  0.00002  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_011883  Ddes_1227  phage transcriptional regulator, AlpA  34.43 
 
 
78 aa  41.6  0.004  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.0127458  n/a   
 
 
-
 
NC_009379  Pnuc_1131  phage transcriptional regulator, AlpA  25.45 
 
 
69 aa  40  0.01  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  0.232619  n/a   
 
 
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