10 homologs were found in PanDaTox collection
for query gene RSP_3641 on replicon NC_007494
Organism: Rhodobacter sphaeroides 2.4.1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007494  RSP_3641  pfkB family carbohydrate kinase  100 
 
 
442 aa  907    Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_1600  PfkB family carbohydrate kinase  47.48 
 
 
445 aa  405  1.0000000000000001e-112  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.744108 
 
 
-
 
NC_010725  Mpop_2515  nucleoside 2-deoxyribosyltransferase  30.14 
 
 
395 aa  60.5  0.00000005  Methylobacterium populi BJ001  Bacteria  normal  normal  0.991601 
 
 
-
 
NC_012030  Hlac_3293  nucleoside 2-deoxyribosyltransferase  29.39 
 
 
406 aa  60.8  0.00000005  Halorubrum lacusprofundi ATCC 49239  Archaea  n/a    n/a   
 
 
-
 
NC_013456  VEA_004305  sugar kinases ribokinase family  34.45 
 
 
413 aa  58.5  0.0000002  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_0336  nucleoside 2-deoxyribosyltransferase  25.65 
 
 
394 aa  53.5  0.000007  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_008528  OEOE_0969  purine deoxyribosyltransferase  27.97 
 
 
147 aa  44.3  0.005  Oenococcus oeni PSU-1  Bacteria  normal  0.0548717  n/a   
 
 
-
 
NC_010676  Bphyt_7201  hypothetical protein  30.16 
 
 
194 aa  43.9  0.005  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B0414  hypothetical protein  29.69 
 
 
194 aa  43.5  0.008  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_4043  nucleoside 2-deoxyribosyltransferase  30.91 
 
 
394 aa  43.1  0.01  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
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