7 homologs were found in PanDaTox collection
for query gene RPD_1600 on replicon NC_007958
Organism: Rhodopseudomonas palustris BisB5



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007958  RPD_1600  PfkB family carbohydrate kinase  100 
 
 
445 aa  917    Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.744108 
 
 
-
 
NC_007494  RSP_3641  pfkB family carbohydrate kinase  47.48 
 
 
442 aa  407  1.0000000000000001e-112  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_004305  sugar kinases ribokinase family  30.05 
 
 
413 aa  64.7  0.000000003  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_012030  Hlac_3293  nucleoside 2-deoxyribosyltransferase  26.78 
 
 
406 aa  53.1  0.00001  Halorubrum lacusprofundi ATCC 49239  Archaea  n/a    n/a   
 
 
-
 
NC_009719  Plav_0336  nucleoside 2-deoxyribosyltransferase  30.37 
 
 
394 aa  52.4  0.00002  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_4043  nucleoside 2-deoxyribosyltransferase  33.91 
 
 
394 aa  51.2  0.00003  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_2515  nucleoside 2-deoxyribosyltransferase  31.66 
 
 
395 aa  47  0.0006  Methylobacterium populi BJ001  Bacteria  normal  normal  0.991601 
 
 
-
 
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