9 homologs were found in PanDaTox collection
for query gene RPD_3960 on replicon NC_007958
Organism: Rhodopseudomonas palustris BisB5



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007958  RPD_3960  hypothetical protein  100 
 
 		 113 aa  209  1e-53  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007778  RPB_4114  hypothetical protein  72.17 
 
 		 114 aa  129  1.0000000000000001e-29  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011004  Rpal_1498  conserved hypothetical protein; putative signal peptide  61.46 
 
 		 112 aa  79.3  0.00000000000002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007925  RPC_0989  hypothetical protein  55.29 
 
 		 119 aa  75.5  0.0000000000003  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.346407  decreased coverage  0.00000526437 
 
 
-
 
NC_007406  Nwi_0605  hypothetical protein  67.5 
 
 		 71 aa  58.5  0.00000003  Nitrobacter winogradskyi Nb-255  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007964  Nham_0697  hypothetical protein  65 
 
 		 114 aa  55.1  0.0000003  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_010172  Mext_0998  hypothetical protein  57.78 
 
 		 105 aa  46.6  0.0001  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011757  Mchl_0961  hypothetical protein  57.78 
 
 		 105 aa  46.6  0.0001  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  0.374723 
 
 
-
 
NC_010725  Mpop_0939  hypothetical protein  52.83 
 
 		 104 aa  45.1  0.0003  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
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