Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0989 |
Symbol | |
ID | 3969713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 1082508 |
End bp | 1082867 |
Gene Length | 360 bp |
Protein Length | 119 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637924105 |
Product | hypothetical protein |
Protein accession | YP_530878 |
Protein GI | 90422508 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.346407 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00000526437 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGCGACACC TTCGGCTCCC ATTGTTGATC TGCGCGGCGA CGCTGGCCTC CGGCGTCGCC GTCGCTCAAG CCCCGCCGAC GACGGCGCCC GCGCAAGTTG CGCCTGCGCC GCAGGCCGGC TCCAGCAATT GCGCGCCGAG CCGCACCGCC CCCGAGCAGG GCAGCATCAC CACGCCTGAT GCCACCACCG GCCAGGGCCG CGAGCCGCTG GGCGACAAGC TCGCCCGCTC CGATGGCGTG CTGTGCCCGC CGGCCGGTGT CGATCCGGAG ATTCGGGCGC CGACACCGGA TGTCGGCAAC ATGCCGGTGA TTCCGCCGCC GGGCAGTCCG GGTGGCGACC CCACCGTCCG GCCGAAATAA
|
Protein sequence | MRHLRLPLLI CAATLASGVA VAQAPPTTAP AQVAPAPQAG SSNCAPSRTA PEQGSITTPD ATTGQGREPL GDKLARSDGV LCPPAGVDPE IRAPTPDVGN MPVIPPPGSP GGDPTVRPK
|
| |