10 homologs were found in PanDaTox collection
for query gene Mext_0998 on replicon NC_010172
Organism: Methylobacterium extorquens PA1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010172  Mext_0998  hypothetical protein  100 
 
 
105 aa  204  3e-52  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_0961  hypothetical protein  100 
 
 
105 aa  204  3e-52  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.374723 
 
 
-
 
NC_010725  Mpop_0939  hypothetical protein  85.71 
 
 
104 aa  147  3e-35  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_6844  hypothetical protein  47.47 
 
 
122 aa  79.7  0.00000000000001  Methylobacterium sp. 4-46  Bacteria  normal  0.677248  normal 
 
 
-
 
NC_011894  Mnod_7580  hypothetical protein  51.14 
 
 
112 aa  76.6  0.0000000000001  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.180521  n/a   
 
 
-
 
NC_011666  Msil_1083  hypothetical protein  43.75 
 
 
95 aa  52.4  0.000002  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_007925  RPC_0989  hypothetical protein  41.57 
 
 
119 aa  46.2  0.0001  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.346407  decreased coverage  0.00000526437 
 
 
-
 
NC_007958  RPD_3960  hypothetical protein  57.78 
 
 
113 aa  46.6  0.0001  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_4114  hypothetical protein  51.02 
 
 
114 aa  45.8  0.0002  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_1498  conserved hypothetical protein; putative signal peptide  57.14 
 
 
112 aa  42  0.003  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>