Gene RPD_3960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3960 
Symbol 
ID4024477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4408125 
End bp4408466 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content71% 
IMG OID637964163 
Producthypothetical protein 
Protein accessionYP_571080 
Protein GI91978421 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGGA CAATTGCGCT CGCATTCGGT TGCATCTTAA TGGCCGCGGC TCCTGCGCTG 
GCGCAGGCGC CGCCAGACGC GCCGTCGACC AAGGCCACTC CTGCGCCTGC CGGTTGCACG
CCATCCTCGC CCACGGCCAA CCCGCCCGGC GTTCCCGGCA GCACCACCGG CGCGGCCCAG
GAACCGCTCA CCGACAAGCT CGCCCGCTCG GACGGTGTGC TGTGTCCGCC CGCAGGGGTT
GATCCCGCGA TTCGCGCACC GACTCCTGAC GCCGGCGCCA CCACCCCGGT CATTCCGCCT
CCGGGTTCGC CCGGCGGCGA TCAAAGCGTG CGTCCGAAAT AG
 
Protein sequence
MTRTIALAFG CILMAAAPAL AQAPPDAPST KATPAPAGCT PSSPTANPPG VPGSTTGAAQ 
EPLTDKLARS DGVLCPPAGV DPAIRAPTPD AGATTPVIPP PGSPGGDQSV RPK