7 homologs were found in PanDaTox collection
for query gene RPD_3652 on replicon NC_007958
Organism: Rhodopseudomonas palustris BisB5



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007958  RPD_3652  hypothetical protein  100 
 
 
201 aa  407  1e-113  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_1360  hypothetical protein  41.71 
 
 
195 aa  139  3e-32  Nitrobacter hamburgensis X14  Bacteria  normal  0.948629  n/a   
 
 
-
 
NC_007958  RPD_0019  hypothetical protein  40.11 
 
 
203 aa  126  2.0000000000000002e-28  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_1980  hypothetical protein  37.37 
 
 
219 aa  111  8.000000000000001e-24  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_0022  hypothetical protein  32.45 
 
 
196 aa  107  9.000000000000001e-23  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.842797  normal 
 
 
-
 
NC_007958  RPD_3655  hypothetical protein  30.05 
 
 
196 aa  77  0.0000000000002  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_1864  hypothetical protein  27.94 
 
 
230 aa  58.5  0.00000006  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
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