10 homologs were found in PanDaTox collection
for query gene RPC_4258 on replicon NC_007925
Organism: Rhodopseudomonas palustris BisB18



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007925  RPC_4258  hypothetical protein  100 
 
 		 111 aa  236  8e-62  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.510545  normal  0.793995 
 
 
-
 
NC_007778  RPB_3280  hypothetical protein  86.11 
 
 		 108 aa  206  9e-53  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007958  RPD_2921  hypothetical protein  84.26 
 
 		 120 aa  202  2e-51  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.181505  normal  0.856557 
 
 
-
 
NC_011004  Rpal_1186  hypothetical protein  78.9 
 
 		 111 aa  186  1e-46  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007643  Rru_A3547  hypothetical protein  72.64 
 
 		 115 aa  172  1.9999999999999998e-42  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_009429  Rsph17025_3448  hypothetical protein  78.35 
 
 		 127 aa  171  3.9999999999999995e-42  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.206617  normal  0.183799 
 
 
-
 
NC_009050  Rsph17029_3562  hypothetical protein  78.35 
 
 		 125 aa  168  2e-41  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.19448  normal  0.42106 
 
 
-
 
NC_013165  Shel_21220  cobalamin biosynthesis protein CbiD  47.76 
 
 		 481 aa  66.2  0.0000000001  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.982335  normal  1 
 
 
-
 
NC_013517  Sterm_2979  cysteine-rich small domain protein  38.82 
 
 		 101 aa  51.6  0.000004  Sebaldella termitidis ATCC 33386  Bacteria  normal  1  n/a   
 
 
-
 
NC_013223  Dret_0070  cysteine-rich small domain protein  48.33 
 
 		 95 aa  48.5  0.00003  Desulfohalobium retbaense DSM 5692  Bacteria  normal  1  normal  1 
 
 
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