Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_21220 |
Symbol | |
ID | 8396011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2353759 |
End bp | 2355204 |
Gene Length | 1446 bp |
Protein Length | 481 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644986871 |
Product | cobalamin biosynthesis protein CbiD |
Protein accession | YP_003144482 |
Protein GI | 257064810 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1903] Cobalamin biosynthesis protein CbiD |
TIGRFAM ID | [TIGR00312] cobalamin biosynthesis protein CbiD |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.982335 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAACAAG GCGCACCGAG CTTCCCGTTT TTCACGCATC GGGACTGTCC GTATTTCCCG TGCCACGAGG GCGCGGATCT GGACACCTTC AACTGCGCGT TCTGCTACTG CCCTCTATAC GCGTTGGGTC CCGCCTGCGG TGGCGATTTC CGCTACAACG ACAAGGGGCT GAAGGACTGC ACCGGCTGTA CGAAGCCCCA CGAAGGCGAC GCGGGCATTC GCATGGTCAA AGAGCGTTTT CGGGACCTTG CGGCTCTGGC TGCCATGCCG ATGCACGATT CTGCGCCCGA ACCTGTCGAG AAACCCGCCT TCGAGCATTA TCTGCAGGTG GGGAAGAAGA ACATGCGCTG CGGCTACACC ACAGGGACGT GCGCGGCTGC GGCCGCCCGC GGCGCGGCGG AGCTCTTGCT TGCCGGGACG GCGCTGCCAG GTGTGCGCAT CTTGACGCCC GCGGGTATCG AAGTGCCGGT TGAGCTGGAA GAATACTCAT CGGGAGACGG CTGGGCGCAG TGCGCGGTCC GCAAGGACGC GGGCGACGAC CCGGATGTGA CCGACGGTTT GCTGGTGTTC GCGCGGGTCT GCCGGACCGA CGGGCCGGGC GTGGACATCG ACGGAGGCGG AGGCGTGGGC CGCGTCACCC GCGAGGGGCT GGACCAGCCC GTGGGTGCGG CGGCCATCAA CCATGTGCCG CGCGAGATGA TTGCCGAACA GGTTTCGGAG GCGGCGTCGT CGAACGGATA CGTCGGCGGC CTGCGCGTGG AAATCTTCGT CCCGGGAGGG GCGGAGGTGG CGCGGCGCAC CTTCAATCCG CGGCTCGGCA TCGAAGGCGG CATCTCCATT CTGGGCACGT CGGGCATCGT GCGGCCCATG AGCGAGCAGG CCATCGTGGA CACTATTCGC ACCGAAATGA ACGTACGCCG CGCGGAGGGC GCCACGCACC TGCTGGTCAT GCCTGGAAAC TACGGGCGCG ATTATGCGGA AGGCGAGCTG GGCCTCAACG TGGACGAGGC CGTGCAATGC TCTAACTATA TAGGAGAGGC GCTGGACATC GCCTCGAGCC TCGGATTCGA AACGCTGCTG CTGGTGGGTC ACATCGGCAA GTTGGCGAAG GTGTCGGCAG GCAATATGAA CACCCATTCC CGCACATCGG ACGCCCGTGC GGAAGTGCTG GCCGCCCACG GGGCGCTGGC CGGCGCATCC TGCGATGCCG TGGAGGCCAT CATGCAGAGC ATCACCACCG ACGAAGCGCT GGCGATCTTG CAGGATGAGG GCGTTTTAGG GCCTGCCATG GCGTCGCTGA CGCAGCGGCT GGGCGAGCGC CTGCAGCAGC GTGCCGGCGA TAATCTGCAG GTGGAATGCA TTGTTTTCTC TCTGGCGCAC GGGCTTTTGG GCAAGACCCC GGGCGCTGAC GGTTTGTTAC GTATCGAAGG GATCGCAGGT TCATGA
|
Protein sequence | MEQGAPSFPF FTHRDCPYFP CHEGADLDTF NCAFCYCPLY ALGPACGGDF RYNDKGLKDC TGCTKPHEGD AGIRMVKERF RDLAALAAMP MHDSAPEPVE KPAFEHYLQV GKKNMRCGYT TGTCAAAAAR GAAELLLAGT ALPGVRILTP AGIEVPVELE EYSSGDGWAQ CAVRKDAGDD PDVTDGLLVF ARVCRTDGPG VDIDGGGGVG RVTREGLDQP VGAAAINHVP REMIAEQVSE AASSNGYVGG LRVEIFVPGG AEVARRTFNP RLGIEGGISI LGTSGIVRPM SEQAIVDTIR TEMNVRRAEG ATHLLVMPGN YGRDYAEGEL GLNVDEAVQC SNYIGEALDI ASSLGFETLL LVGHIGKLAK VSAGNMNTHS RTSDARAEVL AAHGALAGAS CDAVEAIMQS ITTDEALAIL QDEGVLGPAM ASLTQRLGER LQQRAGDNLQ VECIVFSLAH GLLGKTPGAD GLLRIEGIAG S
|
| |