8 homologs were found in PanDaTox collection
for query gene Psyc_1964 on replicon NC_007204
Organism: Psychrobacter arcticus 273-4



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007204  Psyc_1964  TRAP-T family transporter small inner membrane subunit  100 
 
 		 175 aa  342  2e-93  Psychrobacter arcticus 273-4  Bacteria  normal  0.242262  normal  0.045468 
 
 
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NC_007969  Pcryo_2260  TRAP-T family transporter small inner membrane subunit  96.57 
 
 		 175 aa  334  3.9999999999999995e-91  Psychrobacter cryohalolentis K5  Bacteria  normal  0.077758  normal  0.0497776 
 
 
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NC_007963  Csal_0304  TRAP-T family transporter small inner membrane subunit  45.77 
 
 		 175 aa  139  1.9999999999999998e-32  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.9576  n/a   
 
 
-
 
NC_009654  Mmwyl1_0710  hypothetical protein  31.13 
 
 		 169 aa  87.4  9e-17  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009952  Dshi_2032  TRAP transporter permease component  31.3 
 
 		 171 aa  44.3  0.001  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  0.108593 
 
 
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NC_008687  Pden_3498  hypothetical protein  26.06 
 
 		 173 aa  43.1  0.002  Paracoccus denitrificans PD1222  Bacteria  normal  0.0213858  normal  0.106443 
 
 
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NC_007802  Jann_1350  tripartite ATP-independent periplasmic transporter DctQ  27.71 
 
 		 171 aa  41.6  0.006  Jannaschia sp. CCS1  Bacteria  normal  0.810937  normal  1 
 
 
-
 
NC_013501  Rmar_2649  Tripartite ATP-independent periplasmic transporter DctQ component  25.64 
 
 		 184 aa  41.2  0.008  Rhodothermus marinus DSM 4252  Bacteria  normal  0.531292  n/a   
 
 
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