| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2032 |
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| Symbol | |
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| ID | 5713027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2151852 |
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| End bp | 2152367 |
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| Gene Length | 516 bp |
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| Protein Length | 171 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641267956 |
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| Product | TRAP transporter permease component |
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| Protein accession | YP_001533372 |
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| Protein GI | 159044578 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.108593 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAAATT TCCTGCGAAT ACTCGACAAG AACGGGGAGC GATGGGCGCT CTTGCTGTTC
TACGTTATGC TCGTCGCGAC GATGTTCATC GAGGTTCTGC GGCGTGAGAT CATGTCCTAC
TCCTCGATCT GGGGCGAGGA GATCGTCCGC TATTCCTTCA TATACCTCGC CTGGATCGGC
TGCGCCGCCG CGGTCAAGGA ACGCGGCCAT ATCCGCATCG ACGTTCTGAT GCAGTATGTC
GGCCGCCGCG CCAAGGCCCT GCTCTACATC TTCGGGGATC TGGTGATGTT CGTGGTGGCG
ATCATCGCGC TCTACTGGTC GTTCGAGACG GTGCTGGTGT CGGCCAAGTT CGGTTCGGTC
ACACCGGGCC TGCGGATCAG CCAGGTCTGG TTCCTGATGG CGGTGCCCAC CGGGTTCGCC
CTCGTCATTC TTCGCCTCGT GCAATCCTTC CTGCGCGATC TGGCCGACCT TCGTGCGGGA
CGACCCGTTT ACGAAGGCGA CAAGCTGTTC GACTGA
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| Protein sequence | MRNFLRILDK NGERWALLLF YVMLVATMFI EVLRREIMSY SSIWGEEIVR YSFIYLAWIG
CAAAVKERGH IRIDVLMQYV GRRAKALLYI FGDLVMFVVA IIALYWSFET VLVSAKFGSV
TPGLRISQVW FLMAVPTGFA LVILRLVQSF LRDLADLRAG RPVYEGDKLF D
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